RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 RWDD3Q9Y3V2 267 aa17.84■□□□□ 0.45
SCAMP2-208ENST00000566557 PRRC2BQ5JSZ5 2229 aaKnown RBP17.83■□□□□ 0.45
SCAMP2-208ENST00000566557 LAG3P18627 525 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 PBX3P40426 434 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 ERVK-21P61565 698 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 EPC2Q52LR7 807 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 GLRA4Q5JXX5 417 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 LRRC55Q6ZSA7 311 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 ZNF507Q8TCN5 953 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 GDPD5Q8WTR4 605 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 KANSL3Q9P2N6 904 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 AGO2Q9UKV8 859 aaKnown RBP17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 PCDHA5Q9Y5H7 936 aa17.83■□□□□ 0.44
SCAMP2-208ENST00000566557 CITO14578 2027 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 A0A0B4J269 797 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 CSPG5O95196 566 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 KIF20AO95235 890 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 CXCL8P10145 99 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 TNFSF9P41273 254 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 ZBTB41Q5SVQ8 909 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 ISM2Q6H9L7 571 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 HS2ST1Q7LGA3 356 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 COLGALT1Q8NBJ5 622 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 CLP1Q92989 425 aaKnown RBP17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 FAM212AQ96EL1 285 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 SAAL1Q96ER3 474 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 ZNF558Q96NG5 402 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 GSDMAQ96QA5 445 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 PCIF1Q9H4Z3 704 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 CWH43Q9H720 699 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 MAPK8IP1Q9UQF2 711 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 PCDHB12Q9Y5F1 795 aa17.82■□□□□ 0.44
SCAMP2-208ENST00000566557 CLTAP09496 248 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 BMPR1AP36894 532 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 ACOT2P49753 483 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 PPP2R3AQ06190 1150 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 GRIK3Q13003 919 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 KYAT1Q16773 422 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 KNOP1Q1ED39 458 aaKnown RBP17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 BMT2Q1RMZ1 405 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 SMYD4Q8IYR2 804 aaPredicted RBP17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 SNX27Q96L92 541 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 CBWD1Q9BRT8 395 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 FAM213AQ9BRX8 229 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 NRDE2Q9H7Z3 1164 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 RPF1Q9H9Y2 349 aaKnown RBP17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 MIOSQ9NXC5 875 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 DNAJB4Q9UDY4 337 aa17.81■□□□□ 0.44
SCAMP2-208ENST00000566557 GOLGA8IPA6NC78 632 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 EPOPA6NHQ4 379 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 GOLGA8JA6NMD2 632 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 NT5C1B-RDH14C9J2C7 533 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 PI4K2BG5E9Z4 385 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 BIN1O00499 593 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 PTGESO14684 152 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 CLIC2O15247 247 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 THP07101 528 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 LINC00271P0C7V0 271 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 GARTP22102 1010 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 HOXD13P35453 343 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 OR1G1P47890 313 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 CYP2J2P51589 502 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 BCAR1P56945 870 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 GPM6BQ13491 265 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 KCNT2Q6UVM3 1135 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 ZNF280BQ86YH2 543 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 C11orf84Q9BUA3 381 aaPredicted RBP17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 NUP62CLQ9H1M0 184 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 CXCL16Q9H2A7 254 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 CLSTN2Q9H4D0 955 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 AGPAT3Q9NRZ7 376 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 PLAGL2Q9UPG8 496 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 PRG3Q9Y2Y8 225 aaPredicted RBP17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 STYXL1Q9Y6J8 313 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 PLXNA4Q9HCM2 1894 aa17.8■□□□□ 0.44
SCAMP2-208ENST00000566557 INPPL1O15357 1258 aa17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 B4GALT3O60512 393 aa17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 DDHD2O94830 711 aa17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 ADSSP30520 456 aa17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 ALDH7A1P49419 539 aaKnown RBP17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 ZNF658Q5TYW1 1059 aaPredicted RBP17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 KLHL23Q8NBE8 558 aa17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 CPSF3Q9UKF6 684 aaKnown RBP17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 MAN1B1Q9UKM7 699 aa17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 PDCD11Q14690 1871 aaKnown RBP17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 TRIP11Q15643 1979 aa17.79■□□□□ 0.44
SCAMP2-208ENST00000566557 CASTOR2A6NHX0 329 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 TGFB1I1O43294 461 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 FAM189A1O60320 539 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 LDHAP00338 332 aaKnown RBP17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 MCM4P33991 863 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 PPM1AP35813 382 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 SLC11A1P49279 550 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 SPAG1Q07617 926 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 ENOX2Q16206 610 aaKnown RBP17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 GPD1LQ8N335 351 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 GSTCDQ8NEC7 633 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 GOLGA5Q8TBA6 731 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms