RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 GARTP22102 1010 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 ADSSP30520 456 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 SYCP3Q8IZU3 236 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 SCFD1Q8WVM8 642 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 GBP3Q9H0R5 595 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 TISP43B9A030 160 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 KCNE1P15382 129 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 HOXD13P35453 343 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 OSTNP61366 133 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 SNRPFP62306 86 aaKnown RBP22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 TUSC3Q13454 348 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 NAB2Q15742 525 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 KIAA0895Q8NCT3 520 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 SPPL3Q8TCT6 385 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 POMGNT1Q8WZA1 660 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 GBP4Q96PP9 640 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 PPP1R10Q96QC0 940 aaKnown RBP22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 SLC39A2Q9NP94 309 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 STK39Q9UEW8 545 aa22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 AGO2Q9UKV8 859 aaKnown RBP22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.98■■□□□ 1.27
SHCBP1-205ENST00000566016 KIAA0391O15091 583 aaKnown RBP22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 GRM6O15303 877 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 ADRB2P07550 413 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 PBX3P40426 434 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 SLC11A1P49279 550 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 STK4Q13043 487 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 SPATA20Q8TB22 786 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 TSPAN18Q96SJ8 248 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 IKZF4Q9H2S9 585 aa22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 ALG13Q9NP73 1137 aaKnown RBP22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 CPSF3Q9UKF6 684 aaKnown RBP22.97■■□□□ 1.27
SHCBP1-205ENST00000566016 TTC26A0AVF1 554 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 MEFVO15553 781 aaPredicted RBP22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 ALDH2P05091 517 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 IGFBP4P22692 258 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 KRT17Q04695 432 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 SLC10A6Q3KNW5 377 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 TMEM169Q96HH4 297 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 IGSF21Q96ID5 467 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 GSDMAQ96QA5 445 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 CXCL16Q9H2A7 254 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 SLC38A7Q9NVC3 462 aa22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 CGNQ9P2M7 1197 aaKnown RBP22.96■■□□□ 1.27
SHCBP1-205ENST00000566016 SMIM28A0A1B0GU29 152 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 PRPF40AO75400 957 aaKnown RBP22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 CXCL8P10145 99 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 PNOCQ13519 176 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 CAMK1Q14012 370 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 SEZ6Q53EL9 994 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 TIGD5Q53EQ6 642 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 TMEM173Q86WV6 379 aaPredicted RBP22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 POF1BQ8WVV4 589 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 RMND1Q9NWS8 449 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 PUF60Q9UHX1 559 aaKnown RBP22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 FAN1Q9Y2M0 1017 aa22.95■■□□□ 1.26
SHCBP1-205ENST00000566016 NRP1O14786 923 aa22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 LDHAP00338 332 aaKnown RBP22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 TNFSF9P41273 254 aa22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 PPP2R3AQ06190 1150 aa22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 ENOX2Q16206 610 aaKnown RBP22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 KNOP1Q1ED39 458 aaKnown RBP22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 ZBTB41Q5SVQ8 909 aa22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 PDE12Q6L8Q7 609 aaKnown RBP22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 CD302Q8IX05 232 aa22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 RPF1Q9H9Y2 349 aaKnown RBP22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 TLR9Q9NR96 1032 aa22.94■■□□□ 1.26
SHCBP1-205ENST00000566016 NT5C1B-RDH14C9J2C7 533 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 TGFB1I1O43294 461 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 KIF20AO95235 890 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 SMC2O95347 1197 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 DNAJB1P25685 340 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 GLRA4Q5JXX5 417 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 ARMCX5Q6P1M9 558 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 HS2ST1Q7LGA3 356 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 MAFAQ8NHW3 353 aaPredicted RBP22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 GOLGA5Q8TBA6 731 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 UROC1Q96N76 676 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 ZMAT2Q96NC0 199 aaKnown RBP22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 CBWD1Q9BRT8 395 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 GTPBP4Q9BZE4 634 aaKnown RBP22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 AGPAT3Q9NRZ7 376 aa22.93■■□□□ 1.26
SHCBP1-205ENST00000566016 SLC34A2O95436 690 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 OR1G1P47890 313 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 ACOT2P49753 483 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 DDX53Q86TM3 631 aaKnown RBP22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 C12orf56Q8IXR9 622 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 TMEM174Q8WUU8 243 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 BCL7CQ8WUZ0 217 aaPredicted RBP22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 ASB7Q9H672 318 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 MARCH5Q9NX47 278 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 TMEM189-UBE2V1I3L0A0 370 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 EXTL3O43909 919 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 EFEMP2O95967 443 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 HSP90AA2PQ14568 343 aaPredicted RBP22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 CRELD2Q6UXH1 353 aaPredicted RBP22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 NELFCDQ8IXH7 590 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 COLEC11Q9BWP8 271 aa22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 PRG3Q9Y2Y8 225 aaPredicted RBP22.92■■□□□ 1.26
SHCBP1-205ENST00000566016 PCDHA5Q9Y5H7 936 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms