RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	IYD	Q6PHW0	289 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ANGPT2	O15123	496 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	FARP2	O94887	1054 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	GYPC	P04921	128 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SP100	P23497	879 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MMP13	P45452	471 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	FCHO2	Q0JRZ9	810 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TPH2	Q8IWU9	490 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PDPR	Q8NCN5	879 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ZNF75CP	Q92670	426 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	XAGE2	Q96GT9	111 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	OSBPL7	Q9BZF2	842 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SEL1L	Q9UBV2	794 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PEX1	O43933	1283 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TRPC1	P48995	793 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ARHGEF19	Q8IW93	802 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SLFN12	Q8IYM2	578 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SEPT8	Q92599	483 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	KAT2B	Q92831	832 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	EME1	Q96AY2	570 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	KCNK4	Q9NYG8	393 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	HERC5	Q9UII4	1024 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CDY2A	Q9Y6F7	541 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CDY1	Q9Y6F8	540 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	NUDT17	P0C025	328 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	COPB2	P35606	906 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ARHGAP44	Q17R89	818 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CCDC137	Q6PK04	289 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CEP19	Q96LK0	163 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SNRPA	P09012	282 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ATIC	P31939	592 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CALCRL	Q16602	461 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MFSD5	Q6N075	450 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SYCE2	Q6PIF2	218 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PIK3AP1	Q6ZUJ8	805 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	L3MBTL3	Q96JM7	780 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	GPATCH1	Q9BRR8	931 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	DGUOK	Q16854	277 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PDZD4	Q76G19	769 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	BLID	Q8IZY5	108 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	OSBPL11	Q9BXB4	747 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	GIMAP4	Q9NUV9	329 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SMARCAL1	Q9NZC9	954 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ABCC6	O95255	1503 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ADGRA3	Q8IWK6	1321 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	GAP43	P17677	238 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MYL6	P60660	151 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TMPRSS15	P98073	1019 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ACVR2B	Q13705	512 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ZNF280D	Q6N043	979 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PLBD2	Q8NHP8	589 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	AZI2	Q9H6S1	392 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	EXOC1L	A0A1B0GW35	172 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MAP3K13	O43283	966 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SRBD1	Q8N5C6	995 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CCDC33	Q8N5R6	958 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	OSBPL10	Q9BXB5	764 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	LZTS1	Q9Y250	596 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	RAB25	P57735	213 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SMYD1	Q8NB12	490 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	BCORL1	Q5H9F3	1711 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	IST1	P53990	364 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ARL10	Q8N8L6	244 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SLC35G2	Q8TBE7	412 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SNF8	Q96H20	258 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SMYD3	Q9H7B4	428 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SKAP2	O75563	359 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ASMTL	O95671	621 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	FKBP9P1	Q75LS8	142 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	SLC30A5	Q8TAD4	765 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	BRIP1	Q9BX63	1249 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	DDX18	Q9NVP1	670 aa	Known RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ZNF618	Q5T7W0	954 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TTC30A	Q86WT1	665 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TPCN2	Q8NHX9	752 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PTTG2	Q9NZH5	202 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	NR2E3	Q9Y5X4	410 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	COPE	O14579	308 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PDE9A	O76083	593 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	LYN	P07948	512 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MYBL1	P10243	752 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MX2	P20592	715 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	KCNJ2	P63252	427 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MAPK6	Q16659	721 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CCDC85A	Q96PX6	553 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	MAGEB2	O15479	319 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PDE6A	P16499	860 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	PSMC3	P17980	439 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ARHGEF6	Q15052	776 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TBC1D9B	Q66K14	1250 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	NUP93	Q8N1F7	819 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ING2	Q9H160	280 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	HMG20A	Q9NP66	347 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	ALG6	Q9Y672	507 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CFLAR	O15519	480 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	CYP7A1	P22680	504 aa		4.49	□□□□□ -1.69
MACF1-231	ENST00000564288	TAB1	Q15750	504 aa		4.49	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms