RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 PTPN7P35236 360 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 COILP38432 576 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 MTMR2Q13614 643 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 CIAPIN1Q6FI81 312 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 CCDC60Q8IWA6 550 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 ZNF541Q9H0D2 1346 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 EXTL3O43909 919 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 OAS1P00973 400 aaKnown RBP13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 SHBGP04278 402 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 MAN1A1P33908 653 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 TNIP1Q15025 636 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 ZYXQ15942 572 aaKnown RBP13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 PACS2Q86VP3 889 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 MCOLN2Q8IZK6 566 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 GPD1LQ8N335 351 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 GOLGA6L1Q8N7Z2 621 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 OR2W6PQ8NHA6 318 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 PCYT2Q99447 389 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 ACP6Q9NPH0 428 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 CYP26B1Q9NR63 512 aa13.54□□□□□ -0.24
PPP4R3A-206ENST00000554943 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 NR3C2P08235 984 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 LACTB2Q53H82 288 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 BCAS4Q8TDM0 211 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 GLG1Q92896 1179 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 VCPIP1Q96JH7 1222 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 WHRNQ9P202 907 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 AFG3L2Q9Y4W6 797 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 FAM169AQ9Y6X4 670 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 DDX39AO00148 427 aaKnown RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 MYBL1P10243 752 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 CDH5P33151 784 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 PPP2R2AP63151 447 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 CDCA2Q69YH5 1023 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 NLRP14Q86W24 1093 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 PHF13Q86YI8 300 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 ZNF564Q8TBZ8 553 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 KAT2BQ92831 832 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 TATDN2Q93075 761 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 ATG4CQ96DT6 458 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 FMO2Q99518 471 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 POP1Q99575 1024 aaKnown RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 PORCNQ9H237 461 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 TOPORSQ9NS56 1045 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3A-206ENST00000554943 GSCP56915 257 aaPredicted RBP13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 PTK6Q13882 451 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 CEP85LQ5SZL2 805 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 KCTD16Q68DU8 428 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 PLEKHA7Q6IQ23 1121 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 LBX2Q6XYB7 198 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 CNPY4Q8N129 248 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 FAM212AQ96EL1 285 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 CCT8L2Q96SF2 557 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 RASSF4Q9H2L5 321 aa13.52□□□□□ -0.24
PPP4R3A-206ENST00000554943 DENND3A2RUS2 1198 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 ITGBL1O95965 494 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 MYZAPP0CAP1 466 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 RARGP13631 454 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 ABCB4P21439 1286 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 CCT5P48643 541 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 TDRD10Q5VZ19 366 aaKnown RBP13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 ANKS1BQ7Z6G8 1248 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 MCPH1Q8NEM0 835 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 FBXO25Q8TCJ0 367 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 NUP85Q9BW27 656 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 VEZTQ9HBM0 779 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 APOBEC3GQ9HC16 384 aaKnown RBP13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 KIAA1586Q9HCI6 787 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 PROZP22891 400 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 CETN1Q12798 172 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 DMP1Q13316 513 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 PLCB4Q15147 1175 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 SYDE1Q6ZW31 735 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 KIFC3Q9BVG8 833 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 FAM107BQ9H098 131 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 PPME1Q9Y570 386 aa13.52□□□□□ -0.25
PPP4R3A-206ENST00000554943 A0A0B4J269 797 aa13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 C19orf81C9J6K1 198 aa13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 SUPT20HL2P0C7V6 817 aa13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 DRD4P21917 467 aa13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 SLC1A1P43005 524 aa13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 MAP2K1Q02750 393 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 ZNF211Q13398 564 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 SUPT20HL1Q3ZLR7 823 aa13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 DRICH1Q6PGQ1 229 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3A-206ENST00000554943 PIGWQ7Z7B1 504 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms