RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ELMSAN1Q6PJG2 1045 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 ARPINQ7Z6K5 226 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 NT5DC3Q86UY8 548 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 BPHLQ86WA6 291 aaPredicted RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 ZNF713Q8N859 430 aaPredicted RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 U2AF1L4Q8WU68 220 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 MCUR1Q96AQ8 359 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 RUNDC3BQ96NL0 473 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 PHF20Q9BVI0 1012 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 ANKRD2Q9GZV1 360 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 CLK4Q9HAZ1 481 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 NKIRAS1Q9NYS0 192 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 PLK2Q9NYY3 685 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 KANSL3Q9P2N6 904 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 MTRF1LQ9UGC7 380 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 LGALS13Q9UHV8 139 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 PPM1HQ9ULR3 514 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 SLC12A7Q9Y666 1083 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 SPATA31A3Q5VYP0 1347 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 DYTNA2CJ06 578 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 NEURL1BA8MQ27 555 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 FAM47E-STBD1D6RA91 191 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 SPECC1L-ADORA2AF8WAN1 911 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 FUCA1P04066 466 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 NAT2P11245 290 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 PTPN2P17706 415 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 COPB2P35606 906 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 RPS3AP61247 264 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 KCNC4Q03721 635 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 DLG1Q12959 904 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 TNIP1Q15025 636 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 RTN1Q16799 776 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 FBXL19Q6PCT2 694 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 KRT27Q7Z3Y8 459 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 MTDHQ86UE4 582 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 RASSF3Q86WH2 238 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 TTLL11Q8NHH1 800 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 ZNF398Q8TD17 642 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.14□□□□□ -0.79
SIX4-202ENST00000554079 ZFRQ96KR1 1074 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 CENPOQ9BU64 300 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 NDEL1Q9GZM8 345 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 PUS7LQ9H0K6 701 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 SEMA6BQ9H3T3 888 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 GPAMQ9HCL2 828 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 DISC1Q9NRI5 854 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 TAS2R1Q9NYW7 299 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.14□□□□□ -0.79
SIX4-202ENST00000554079 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 LAMB1P07942 1786 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 DLEC1Q9Y238 1755 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 ARHGAP10A1A4S6 786 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 CCDC160A6NGH7 325 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 TTLL1O95922 423 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 CLPTM1O96005 669 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 ALAS1P13196 640 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 VCLP18206 1134 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 AP2B1P63010 937 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 TMEM266Q2M3C6 531 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 ARL13BQ3SXY8 428 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 C10orf76Q5T2E6 689 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 TMCO4Q5TGY1 634 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 TRMT10CQ7L0Y3 403 aaKnown RBP10.13□□□□□ -0.79
SIX4-202ENST00000554079 ZNF804AQ7Z570 1209 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 NET1Q7Z628 596 aaPredicted RBP10.13□□□□□ -0.79
SIX4-202ENST00000554079 CABP7Q86V35 215 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 SPATA5Q8NB90 893 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 APPBP2Q92624 585 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 DDX12PQ92771 950 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 CCDC127Q96BQ5 260 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 NSL1Q96IY1 281 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 PANX3Q96QZ0 392 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 TUBB6Q9BUF5 446 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 FHDC1Q9C0D6 1143 aaPredicted RBP10.13□□□□□ -0.79
SIX4-202ENST00000554079 CDC42EP4Q9H3Q1 356 aaKnown RBP10.13□□□□□ -0.79
SIX4-202ENST00000554079 GPR108Q9NPR9 543 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 KBTBD4Q9NVX7 518 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 PARP2Q9UGN5 583 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 PRELID1Q9Y255 219 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 ACTL7BQ9Y614 415 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 CCDC61Q9Y6R9 512 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 PSME4Q14997 1843 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 USP6P35125 1406 aa10.13□□□□□ -0.79
SIX4-202ENST00000554079 TNFRSF10AO00220 468 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 DDX3YO15523 660 aaKnown RBP10.12□□□□□ -0.79
SIX4-202ENST00000554079 GPAA1O43292 621 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 KDM1AO60341 852 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 MAGEC1O60732 1142 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 TCEA3O75764 348 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 HAUS5O94927 633 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 CD48P09326 243 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ENTPD1P49961 510 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 AQP4P55087 323 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 XIAPP98170 497 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 GCKRQ14397 625 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 NPY5RQ15761 445 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 469.1 ms