RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TTC26A0AVF1 554 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 TGFB1I1O43294 461 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 FGF18O76093 207 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 ITGB1P05556 798 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 KRT17Q04695 432 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 TUSC3Q13454 348 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 PNOCQ13519 176 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 ADGRE1Q14246 886 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 PTPROQ16827 1216 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 COBLL1Q53SF7 1204 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 KIAA0895Q8NCT3 520 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 POMGNT1Q8WZA1 660 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 SLC38A7Q9NVC3 462 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 STXBP5LQ9Y2K9 1186 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 PCDHA5Q9Y5H7 936 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 SZT2Q5T011 3432 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 TISP43B9A030 160 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 RFXAPO00287 272 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 MEFVO15553 781 aaPredicted RBP15.77■□□□□ 0.12
DDX54-203ENST00000546869 B4GALT3O60512 393 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 ZC3H11AO75152 810 aaKnown RBP eCLIP15.77■□□□□ 0.12
DDX54-203ENST00000546869 SLC11A1P49279 550 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 OSTNP61366 133 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 HSP90AA2PQ14568 343 aaPredicted RBP15.77■□□□□ 0.12
DDX54-203ENST00000546869 PDE12Q6L8Q7 609 aaKnown RBP15.77■□□□□ 0.12
DDX54-203ENST00000546869 GUF1Q8N442 669 aaKnown RBP15.77■□□□□ 0.12
DDX54-203ENST00000546869 GOLGA5Q8TBA6 731 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 MYLIPQ8WY64 445 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 MRPL38Q96DV4 380 aaKnown RBP15.77■□□□□ 0.12
DDX54-203ENST00000546869 IGSF21Q96ID5 467 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 IKZF4Q9H2S9 585 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 ASB7Q9H672 318 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 RPF1Q9H9Y2 349 aaKnown RBP15.77■□□□□ 0.12
DDX54-203ENST00000546869 KIAA1586Q9HCI6 787 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 DNAJB4Q9UDY4 337 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 PUF60Q9UHX1 559 aaKnown RBP15.77■□□□□ 0.12
DDX54-203ENST00000546869 FAN1Q9Y2M0 1017 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 MTCH2Q9Y6C9 303 aa15.77■□□□□ 0.12
DDX54-203ENST00000546869 GOLGA6L22H0YM25 854 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 PDXKO00764 312 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 NRP1O14786 923 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 GRM6O15303 877 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 EFEMP2O95967 443 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 HARSP12081 509 aaKnown RBP15.76■□□□□ 0.11
DDX54-203ENST00000546869 FOSL2P15408 326 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 CYP3A5P20815 502 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 TNFSF9P41273 254 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 CAMK1Q14012 370 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 ZBTB6Q15916 424 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 ENOX2Q16206 610 aaKnown RBP15.76■□□□□ 0.11
DDX54-203ENST00000546869 CRELD2Q6UXH1 353 aaPredicted RBP15.76■□□□□ 0.11
DDX54-203ENST00000546869 HS2ST1Q7LGA3 356 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 DDX53Q86TM3 631 aaKnown RBP15.76■□□□□ 0.11
DDX54-203ENST00000546869 GDPD5Q8WTR4 605 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 SMARCE1Q969G3 411 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 FBXL18Q96ME1 805 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 UROC1Q96N76 676 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 ZMAT2Q96NC0 199 aaKnown RBP15.76■□□□□ 0.11
DDX54-203ENST00000546869 COLEC11Q9BWP8 271 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 CXCL16Q9H2A7 254 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 ALG13Q9NP73 1137 aaKnown RBP15.76■□□□□ 0.11
DDX54-203ENST00000546869 AGPAT3Q9NRZ7 376 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 DERAQ9Y315 318 aa15.76■□□□□ 0.11
DDX54-203ENST00000546869 EXTL3O43909 919 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 CXCL8P10145 99 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 PPP2R3AQ06190 1150 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 MYBPC2Q14324 1141 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 SEZ6Q53EL9 994 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 ZBTB41Q5SVQ8 909 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 ZNF658Q5TYW1 1059 aaPredicted RBP15.75■□□□□ 0.11
DDX54-203ENST00000546869 ARMCX5Q6P1M9 558 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 NT5DC4Q86YG4 428 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 SLC9A9Q8IVB4 645 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 GPD1LQ8N335 351 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 POF1BQ8WVV4 589 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 DDX27Q96GQ7 796 aaKnown RBP15.75■□□□□ 0.11
DDX54-203ENST00000546869 TMEM169Q96HH4 297 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 CBWD1Q9BRT8 395 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 KCTD10Q9H3F6 313 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 TRAF3IP3Q9Y228 551 aa15.75■□□□□ 0.11
DDX54-203ENST00000546869 LACTBL1A8MY62 500 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 TMEM189-UBE2V1I3L0A0 370 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 FSCN2O14926 492 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 IL18RAPO95256 599 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 RPL9P32969 192 aaKnown RBP15.74■□□□□ 0.11
DDX54-203ENST00000546869 PBX3P40426 434 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 OR1G1P47890 313 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 ACOT2P49753 483 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 NFIL3Q16649 462 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 DCLRE1AQ6PJP8 1040 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 NELFCDQ8IXH7 590 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 GPR65Q8IYL9 337 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 RNF168Q8IYW5 571 aaPredicted RBP15.74■□□□□ 0.11
DDX54-203ENST00000546869 NGRNQ9NPE2 291 aaKnown RBP15.74■□□□□ 0.11
DDX54-203ENST00000546869 DMAC2Q9NW81 257 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 HSPBP1Q9NZL4 362 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 C2CD2Q9Y426 696 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 NLRC5Q86WI3 1866 aa15.74■□□□□ 0.11
DDX54-203ENST00000546869 NT5C1B-RDH14C9J2C7 533 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms