RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 KRT13P13646 458 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SLC9A1P19634 815 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 TNFAIP3P21580 790 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SCP2P22307 547 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 HPDP32754 393 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SHMT1P34896 483 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 NF2P35240 595 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 EIF1AXP47813 144 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 HIRAP54198 1017 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 HSPA2P54652 639 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 PSMA6P60900 246 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 MAGOHP61326 146 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 GPC5P78333 572 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 GPSM2P81274 684 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ATP2B2Q01814 1243 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ARID5AQ03989 594 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 KLRC3Q07444 240 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 QRICH1Q2TAL8 776 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SPDYAQ5MJ70 313 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 PPP1R26Q5T8A7 1209 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 TCERG1LQ5VWI1 586 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 MSL1Q68DK7 614 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 CYB5D1Q6P9G0 228 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 TMEM179Q6ZVK1 233 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 USP37Q86T82 979 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 FBXO11Q86XK2 927 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 JAMLQ86YT9 394 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 APLFQ8IW19 511 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC116Q8IYX3 515 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 RIBC1Q8N443 379 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SAMD3Q8N6K7 520 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SLC35G2Q8TBE7 412 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ATP8B4Q8TF62 1192 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 GRK7Q8WTQ7 553 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 MAGOHBQ96A72 148 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 HVCN1Q96D96 273 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 HOOK2Q96ED9 719 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 TRIM11Q96F44 468 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SERPINB12Q96P63 405 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF317Q96PQ6 595 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 FAM129BQ96TA1 746 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 HSD17B14Q9BPX1 270 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 DDX47Q9H0S4 455 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 ST6GALNAC4Q9H4F1 302 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 QTRT2Q9H974 415 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 PPANQ9NQ55 473 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 USP40Q9NVE5 1235 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 WHRNQ9P202 907 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 AMACRQ9UHK6 382 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 MCM8Q9UJA3 840 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 RPL26L1Q9UNX3 145 aaKnown RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 SLC12A4Q9UP95 1085 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 QSER1Q2KHR3 1735 aa6.95□□□□□ -1.3
SNHG1-225ENST00000545920 FRMPD2Q68DX3 1309 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-225ENST00000545920 MEIS2O14770 477 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 PPIP5K2O43314 1243 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 CTNND1O60716 968 aaKnown RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 PLA2G6O60733 806 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 GCNT3O95395 438 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 MMEP08473 750 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 BMP1P13497 986 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 VCAM1P19320 739 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 ITIH2P19823 946 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 GTF2H1P32780 548 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 HOXD13P35453 343 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 SEC24CP53992 1094 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 SLC18A1P54219 525 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 MYL7Q01449 175 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC15Q0P6D6 951 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 CRYMQ14894 314 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 DRAP1Q14919 205 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 UBE2SQ16763 222 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 DCAF17Q5H9S7 520 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 LDLRAD1Q5T700 205 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 SLFN13Q68D06 897 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 RINT1Q6NUQ1 792 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 C1orf186Q6ZWK4 172 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 ENOSF1Q7L5Y1 443 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 NIPA1Q7RTP0 329 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF720Q7Z2F6 126 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF295-AS1Q8N0V1 137 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 LRRC47Q8N1G4 583 aaKnown RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 GLIS3Q8NEA6 775 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 TBC1D16Q8TBP0 767 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 ZKSCAN4Q969J2 545 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 TEKT1Q969V4 418 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 LENG9Q96B70 501 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 ALKBH8Q96BT7 664 aaKnown RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 DMRTB1Q96MA1 342 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 AGPAT1Q99943 283 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 EIF2AK1Q9BQI3 630 aaKnown RBP6.94□□□□□ -1.3
SNHG1-225ENST00000545920 ZSWIM1Q9BR11 485 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 STRA6Q9BX79 667 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 IDI2Q9BXS1 227 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 OSBPL7Q9BZF2 842 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 PHACTR1Q9C0D0 580 aa6.94□□□□□ -1.3
SNHG1-225ENST00000545920 INTS2Q9H0H0 1204 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms