RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 HPS3Q969F9 1004 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 PPP2R3CQ969Q6 453 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 ACCSQ96QU6 501 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 VN1R3Q9BXE9 311 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 FGFBP2Q9BYJ0 223 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 IKZF4Q9H2S9 585 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 TLE6Q9H808 572 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 ENTPD7Q9NQZ7 604 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 THEGQ9P2T0 379 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 EXOC7Q9UPT5 735 aa17.72■□□□□ 0.43
SSSCA1-202ENST00000526433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 TISP43B9A030 160 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 OGTO15294 1046 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 PRPF6O94906 941 aaKnown RBP17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 CLTAP09496 248 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 ALCAMQ13740 583 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 BMS1Q14692 1282 aaKnown RBP17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 SLC10A6Q3KNW5 377 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 GLRA4Q5JXX5 417 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 SLFN12LQ6IEE8 588 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 UNC13DQ70J99 1090 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 MRPL43Q8N983 215 aaKnown RBP17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 SNX27Q96L92 541 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 PPP1R10Q96QC0 940 aaKnown RBP17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 MSTO1Q9BUK6 570 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 GOLPH3LQ9H4A5 285 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 CACNG4Q9UBN1 327 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 STYXL1Q9Y6J8 313 aa17.71■□□□□ 0.43
SSSCA1-202ENST00000526433 PVALEFA0A1B0GWK0 134 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 GOLGA6L4A6NEF3 574 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 CASTOR2A6NHX0 329 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 HIDE1A8MVS5 230 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 F8W810 466 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 PER2O15055 1255 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 MEFVO15553 781 aaPredicted RBP17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 CTSAP10619 480 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 KCNE1P15382 129 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 TNFSF9P41273 254 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 NRIP1P48552 1158 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 TFF2Q03403 129 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 SMC1AQ14683 1233 aaKnown RBP17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 KYAT1Q16773 422 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 EP400NLQ6ZTU2 488 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 SYCP3Q8IZU3 236 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 PABPC5Q96DU9 382 aaKnown RBP17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 ZMAT2Q96NC0 199 aaKnown RBP17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 UBE2ZQ9H832 354 aaPredicted RBP17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 CLDND1Q9NY35 253 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 CHMP5Q9NZZ3 219 aa17.7■□□□□ 0.42
SSSCA1-202ENST00000526433 C2orf71A6NGG8 1288 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 FAM189A1O60320 539 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 TADA2AO75478 443 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 ZNF202O95125 648 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 EFEMP2O95967 443 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 MRPS5P82675 430 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 ADAM15Q13444 863 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 COL19A1Q14993 1142 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 POSTNQ15063 836 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 CTC1Q2NKJ3 1217 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 FAM26FQ5R3K3 315 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 ZBTB41Q5SVQ8 909 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 TAS1R1Q7RTX1 841 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 GLIS3Q8NEA6 775 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 AUTS2Q8WXX7 1259 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 PLEKHA5Q9HAU0 1116 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 CNTN3Q9P232 1028 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 STK39Q9UEW8 545 aa17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 AGO2Q9UKV8 859 aaKnown RBP17.69■□□□□ 0.42
SSSCA1-202ENST00000526433 TTC26A0AVF1 554 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 LACTBL1A8MY62 500 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 LINC01565O15544 149 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 KLRC4O43908 158 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 SOD2P04179 222 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 CXCL8P10145 99 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 ADSSP30520 456 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 CA8P35219 290 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 EHHADHQ08426 723 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 DUSP6Q16828 381 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 DCLRE1AQ6PJP8 1040 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 KRBA2Q6ZNG9 492 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 EFHBQ8N7U6 833 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 ZNF507Q8TCN5 953 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 POMGNT1Q8WZA1 660 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 GPR62Q9BZJ7 368 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 TMEM206Q9H813 350 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 SLC38A7Q9NVC3 462 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 CPSF3Q9UKF6 684 aaKnown RBP17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 ADAM28Q9UKQ2 775 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
SSSCA1-202ENST00000526433 KCNA5P22460 613 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 HOXD13P35453 343 aa17.67■□□□□ 0.42
SSSCA1-202ENST00000526433 LTBRP36941 435 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms