RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 CCDC47Q96A33 483 aaKnown RBP11.04□□□□□ -0.64
TTC39A-213ENST00000524442 SNX27Q96L92 541 aa11.04□□□□□ -0.64
TTC39A-213ENST00000524442 PPP1R10Q96QC0 940 aaKnown RBP11.04□□□□□ -0.64
TTC39A-213ENST00000524442 MSTO1Q9BUK6 570 aa11.04□□□□□ -0.64
TTC39A-213ENST00000524442 HAPLN2Q9GZV7 340 aa11.04□□□□□ -0.64
TTC39A-213ENST00000524442 BLZF1Q9H2G9 400 aa11.04□□□□□ -0.64
TTC39A-213ENST00000524442 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
TTC39A-213ENST00000524442 AGO2Q9UKV8 859 aaKnown RBP11.04□□□□□ -0.64
TTC39A-213ENST00000524442 IRAK3Q9Y616 596 aa11.04□□□□□ -0.64
TTC39A-213ENST00000524442 KIAA1671Q9BY89 1806 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TTC26A0AVF1 554 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 ANKRD63C9JTQ0 380 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 PRPF6O94906 941 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 ADRB2P07550 413 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 CTSAP10619 480 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 CASP5P51878 434 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 FAM160A1Q05DH4 1040 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 KCNA1Q09470 495 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 SMC1AQ14683 1233 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 COL19A1Q14993 1142 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 SKIV2LQ15477 1246 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 BMT2Q1RMZ1 405 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 SLC10A6Q3KNW5 377 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TCEAL5Q5H9L2 206 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TMEM173Q86WV6 379 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 GRAMD1CQ8IYS0 662 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 FMR1NBQ8N0W7 255 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 VPS52Q8N1B4 723 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 MRPL43Q8N983 215 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 POMGNT1Q8WZA1 660 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 HLA-CQ95604 372 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 DDX27Q96GQ7 796 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 IPO9Q96P70 1041 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 CDCA3Q99618 268 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TCF25Q9BQ70 676 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 ZBP1Q9H171 429 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 RPF1Q9H9Y2 349 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 ENTPD7Q9NQZ7 604 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 EXOC1Q9NV70 894 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 HOOK1Q9UJC3 728 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 CPSF3Q9UKF6 684 aaKnown RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 SSX2IPQ9Y2D8 614 aa11.03□□□□□ -0.64
TTC39A-213ENST00000524442 PRG3Q9Y2Y8 225 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-213ENST00000524442 TCHHQ07283 1943 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 XPOTO43592 962 aaKnown RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 KLRC4O43908 158 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 KIF20AO95235 890 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 EFEMP2O95967 443 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 SOD2P04179 222 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 CXCL8P10145 99 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 CYP3A5P20815 502 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 CASP1P29466 404 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ADSSP30520 456 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 RPL9P32969 192 aaKnown RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 IRS1P35568 1242 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ERVFC1P60507 584 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 PPP2R3AQ06190 1150 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ELAVL2Q12926 359 aaKnown RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 SNW1Q13573 536 aaKnown RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ENOX2Q16206 610 aaKnown RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 AAK1Q2M2I8 961 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 DCLRE1AQ6PJP8 1040 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 RNF168Q8IYW5 571 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ENGASEQ8NFI3 743 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 BCL7CQ8WUZ0 217 aaPredicted RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ATXN2LQ8WWM7 1075 aaKnown RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 PABPC5Q96DU9 382 aaKnown RBP11.02□□□□□ -0.65
TTC39A-213ENST00000524442 HERC2P3Q9BVR0 1158 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 FGFBP2Q9BYJ0 223 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ASB7Q9H672 318 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 TLE6Q9H808 572 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 THEGQ9P2T0 379 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 ADAM28Q9UKQ2 775 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 DERAQ9Y315 318 aa11.02□□□□□ -0.65
TTC39A-213ENST00000524442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.01□□□□□ -0.65
TTC39A-213ENST00000524442 CASTOR2A6NHX0 329 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 TISP43B9A030 160 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 TADA2AO75478 443 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 RHOBTB3O94955 611 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 CXCL14O95715 111 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 RPN1P04843 607 aaKnown RBP11.01□□□□□ -0.65
TTC39A-213ENST00000524442 DPYDQ12882 1025 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 KCNB1Q14721 858 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 UPP1Q16831 310 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 CTC1Q2NKJ3 1217 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 SEZ6Q53EL9 994 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 GLRA4Q5JXX5 417 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 PLPP4Q5VZY2 271 aa11.01□□□□□ -0.65
TTC39A-213ENST00000524442 ARMCX5Q6P1M9 558 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms