RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 FAM189A1O60320 539 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 FGF18O76093 207 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 GALTP07902 379 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 HOXD13P35453 343 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 PLCB3Q01970 1234 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 PPP2R3AQ06190 1150 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 TUSC3Q13454 348 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 CD302Q8IX05 232 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 NELFCDQ8IXH7 590 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 COLGALT2Q8IYK4 626 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 LMBRD1Q9NUN5 540 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 STK39Q9UEW8 545 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 PUF60Q9UHX1 559 aaKnown RBP24.62■■□□□ 1.53
SKP1-206ENST00000519321 CPSF3Q9UKF6 684 aaKnown RBP24.62■■□□□ 1.53
SKP1-206ENST00000519321 PLAGL2Q9UPG8 496 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 FAN1Q9Y2M0 1017 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 PCDHA5Q9Y5H7 936 aa24.62■■□□□ 1.53
SKP1-206ENST00000519321 LPXNO60711 386 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 ITGB1P05556 798 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 KCNE1P15382 129 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 FOSL2P15408 326 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 SLC10A6Q3KNW5 377 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 SEZ6Q53EL9 994 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 SLC39A11Q8N1S5 342 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 SPATA20Q8TB22 786 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 TMEM169Q96HH4 297 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 IKZF4Q9H2S9 585 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 DNAJB4Q9UDY4 337 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 LZTS1Q9Y250 596 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 COL4A4P53420 1690 aaPredicted RBP24.61■■□□□ 1.53
SKP1-206ENST00000519321 CITO14578 2027 aa24.61■■□□□ 1.53
SKP1-206ENST00000519321 SMIM28A0A1B0GU29 152 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 CXCL8P10145 99 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 IGFBP4P22692 258 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 TNFSF9P41273 254 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 OR1G1P47890 313 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 SLC11A1P49279 550 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 SPPL3Q8TCT6 385 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 PPP1R10Q96QC0 940 aaKnown RBP24.6■■□□□ 1.53
SKP1-206ENST00000519321 COLEC11Q9BWP8 271 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 KIAA1586Q9HCI6 787 aa24.6■■□□□ 1.53
SKP1-206ENST00000519321 TTC26A0AVF1 554 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 NRP1O14786 923 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 TGFB1I1O43294 461 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 EXTL3O43909 919 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 ADRB2P07550 413 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 PBX3P40426 434 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 ACOT2P49753 483 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 ENOX2Q16206 610 aaKnown RBP24.59■■□□□ 1.53
SKP1-206ENST00000519321 GPD1LQ8N335 351 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 GUF1Q8N442 669 aaKnown RBP24.59■■□□□ 1.53
SKP1-206ENST00000519321 MRPL38Q96DV4 380 aaKnown RBP24.59■■□□□ 1.53
SKP1-206ENST00000519321 IGSF21Q96ID5 467 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 UROC1Q96N76 676 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 CBWD1Q9BRT8 395 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 ALG13Q9NP73 1137 aaKnown RBP24.59■■□□□ 1.53
SKP1-206ENST00000519321 AGPAT3Q9NRZ7 376 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 STXBP5LQ9Y2K9 1186 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 MYO9BQ13459 2157 aa24.59■■□□□ 1.53
SKP1-206ENST00000519321 NT5C1B-RDH14C9J2C7 533 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 GRM6O15303 877 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 XPOTO43592 962 aaKnown RBP24.58■■□□□ 1.53
SKP1-206ENST00000519321 B4GALT3O60512 393 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 ADGRE1Q14246 886 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 NAB2Q15742 525 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 GLRA4Q5JXX5 417 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 ZBTB41Q5SVQ8 909 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 ZNF658Q5TYW1 1059 aaPredicted RBP24.58■■□□□ 1.53
SKP1-206ENST00000519321 C12orf56Q8IXR9 622 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 POF1BQ8WVV4 589 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 ASB7Q9H672 318 aa24.58■■□□□ 1.53
SKP1-206ENST00000519321 PDXKO00764 312 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 IL18RAPO95256 599 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 BMS1Q14692 1282 aaKnown RBP24.57■■□□□ 1.52
SKP1-206ENST00000519321 PDE12Q6L8Q7 609 aaKnown RBP24.57■■□□□ 1.52
SKP1-206ENST00000519321 DDX27Q96GQ7 796 aaKnown RBP24.57■■□□□ 1.52
SKP1-206ENST00000519321 FAM213AQ9BRX8 229 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 CXCL16Q9H2A7 254 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 PCIF1Q9H4Z3 704 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 HSPBP1Q9NZL4 362 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 DERAQ9Y315 318 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 MTCH2Q9Y6C9 303 aa24.57■■□□□ 1.52
SKP1-206ENST00000519321 LACTBL1A8MY62 500 aa24.56■■□□□ 1.52
SKP1-206ENST00000519321 TIGD5Q53EQ6 642 aa24.56■■□□□ 1.52
SKP1-206ENST00000519321 COBLL1Q53SF7 1204 aa24.56■■□□□ 1.52
SKP1-206ENST00000519321 CRELD2Q6UXH1 353 aaPredicted RBP24.56■■□□□ 1.52
SKP1-206ENST00000519321 DDX53Q86TM3 631 aaKnown RBP24.56■■□□□ 1.52
SKP1-206ENST00000519321 FAM212AQ96EL1 285 aa24.56■■□□□ 1.52
SKP1-206ENST00000519321 SAAL1Q96ER3 474 aa24.56■■□□□ 1.52
SKP1-206ENST00000519321 ZMAT2Q96NC0 199 aaKnown RBP24.56■■□□□ 1.52
SKP1-206ENST00000519321 UBQLN1Q9UMX0 589 aaKnown RBP24.56■■□□□ 1.52
SKP1-206ENST00000519321 PRG3Q9Y2Y8 225 aaPredicted RBP24.56■■□□□ 1.52
SKP1-206ENST00000519321 CHD9Q3L8U1 2897 aa24.56■■□□□ 1.52
SKP1-206ENST00000519321 SZT2Q5T011 3432 aa24.56■■□□□ 1.52
SKP1-206ENST00000519321 TRIP11Q15643 1979 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 CLIC2O15247 247 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 MEFVO15553 781 aaPredicted RBP24.55■■□□□ 1.52
SKP1-206ENST00000519321 CALUO43852 315 aaPredicted RBP24.55■■□□□ 1.52
SKP1-206ENST00000519321 CYP3A5P20815 502 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 PPP1R2P41236 205 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms