RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 MAML3Q96JK9 1138 aa13.15□□□□□ -0.31
LIN54-206ENST00000506560 INO80BQ9C086 356 aaPredicted RBP13.15□□□□□ -0.31
LIN54-206ENST00000506560 SMARCAD1Q9H4L7 1026 aa13.15□□□□□ -0.31
LIN54-206ENST00000506560 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.31
LIN54-206ENST00000506560 BTNL10A8MVZ5 291 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 KCNK3O14649 394 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 CLDN3O15551 220 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 C22orf31O95567 290 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 CST3P01034 146 aaPredicted RBP13.14□□□□□ -0.31
LIN54-206ENST00000506560 VTNP04004 478 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 KRT5P13647 590 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 RFX1P22670 979 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 CLDN10P78369 228 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 LONRF2Q1L5Z9 754 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
LIN54-206ENST00000506560 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 PHLDB2Q86SQ0 1253 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 DAAM2Q86T65 1068 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 ACO2Q99798 780 aaKnown RBP13.14□□□□□ -0.31
LIN54-206ENST00000506560 ARGLU1Q9NWB6 273 aaPredicted RBP13.14□□□□□ -0.31
LIN54-206ENST00000506560 CLSTN1O94985 981 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 KIF4AO95239 1232 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 PRLRP16471 622 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 PIK3CAP42336 1068 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 MFAP3P55082 362 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 CKAP4Q07065 602 aaKnown RBP13.14□□□□□ -0.31
LIN54-206ENST00000506560 BEND6Q5SZJ8 279 aaPredicted RBP13.14□□□□□ -0.31
LIN54-206ENST00000506560 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
LIN54-206ENST00000506560 BTBD6Q96KE9 485 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 C16orf70Q9BSU1 422 aa13.14□□□□□ -0.31
LIN54-206ENST00000506560 PLA2G4AP47712 749 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 GRB14Q14449 540 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 CCDC181Q5TID7 509 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 TXLNBQ8N3L3 684 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 FUT8Q9BYC5 575 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 MTMR12Q9C0I1 747 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 ERAP1Q9NZ08 941 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 FLRT1Q9NZU1 646 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 NUB1Q9Y5A7 615 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 CCDC151A5D8V7 595 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 ZSCAN5CA6NGD5 496 aaPredicted RBP13.13□□□□□ -0.31
LIN54-206ENST00000506560 HBP1O60381 514 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 GH1P01241 217 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 TMEM253P0C7T8 217 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 ANXA13P27216 316 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 MAPK6Q16659 721 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 NT5DC3Q86UY8 548 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
LIN54-206ENST00000506560 RFFLQ8WZ73 363 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 STXBP5LQ9Y2K9 1186 aa13.13□□□□□ -0.31
LIN54-206ENST00000506560 A0A087WZ62 844 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 NCANO14594 1321 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 TOM1L1O75674 476 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 ITGBL1O95965 494 aaPredicted RBP13.12□□□□□ -0.31
LIN54-206ENST00000506560 GTF2H1P32780 548 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
LIN54-206ENST00000506560 RPS6KA1Q15418 735 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 SLFN12LQ6IEE8 588 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
LIN54-206ENST00000506560 MRPL4Q9BYD3 311 aaKnown RBP13.12□□□□□ -0.31
LIN54-206ENST00000506560 ARFGAP3Q9NP61 516 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 FAM53CQ9NYF3 392 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 KAT6AQ92794 2004 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 MEFVO15553 781 aaPredicted RBP13.12□□□□□ -0.31
LIN54-206ENST00000506560 FGFR4P22455 802 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 CCL14Q16627 93 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 DCAF12L1Q5VU92 463 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 AADACL2Q6P093 401 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 PEX26Q7Z412 305 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 SLFN11Q7Z7L1 901 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 KCNN1Q92952 543 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 CPB2Q96IY4 423 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
LIN54-206ENST00000506560 CGRRF1Q99675 332 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 ISCUQ9H1K1 167 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 C1orf112Q9NSG2 853 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
LIN54-206ENST00000506560 ANKRD62A6NC57 917 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 MARCKSL1P49006 195 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
LIN54-206ENST00000506560 TRADDQ15628 312 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 PLEKHH3Q7Z736 793 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 EFCAB13Q8IY85 973 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 PPTC7Q8NI37 304 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 TINF2Q9BSI4 451 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 TRIM7Q9C029 511 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 INTUQ9ULD6 942 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 A0A0A6YYK5 440 aaPredicted RBP13.11□□□□□ -0.31
LIN54-206ENST00000506560 GPR25O00155 361 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 STRNO43815 780 aa13.11□□□□□ -0.31
LIN54-206ENST00000506560 ACO1P21399 889 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms