RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 C1orf112Q9NSG2 853 aa5.5□□□□□ -1.53
CSTF1-207ENST00000498689 PCOLCE2Q9UKZ9 415 aa5.5□□□□□ -1.53
CSTF1-207ENST00000498689 ST3GAL5Q9UNP4 418 aa5.5□□□□□ -1.53
CSTF1-207ENST00000498689 SLC8A2Q9UPR5 921 aa5.5□□□□□ -1.53
CSTF1-207ENST00000498689 AKAP2Q9Y2D5 859 aa5.5□□□□□ -1.53
CSTF1-207ENST00000498689 AK5Q9Y6K8 562 aa5.5□□□□□ -1.53
CSTF1-207ENST00000498689 NBEAL2Q6ZNJ1 2754 aa5.5□□□□□ -1.53
CSTF1-207ENST00000498689 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 WIPF3A6NGB9 483 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 GAS2O43903 313 aaKnown RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 EIF2AK2P19525 551 aaKnown RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 ITPKAP23677 461 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 SLC11A1P49279 550 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 IGBP1P78318 339 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 DSC3Q14574 896 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 ESPL1Q14674 2120 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 SMAD1Q15797 465 aaKnown RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 GRIK4Q16099 956 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 LINC00303Q3SY05 128 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 PREPLQ4J6C6 727 aaPredicted RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 CCDC157Q569K6 752 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 DGKKQ5KSL6 1271 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 TTC39AQ5SRH9 613 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 ZNF746Q6NUN9 644 aaPredicted RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 ABI1Q8IZP0 508 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 GALNT15Q8N3T1 639 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 FGF11Q92914 225 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 IRF7Q92985 503 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 NXPE2Q96DL1 559 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 B3GALT6Q96L58 329 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 MDFIQ99750 246 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 TRMT61BQ9BVS5 477 aaKnown RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 EPN3Q9H201 632 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 ELAC1Q9H777 363 aaKnown RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 NRDE2Q9H7Z3 1164 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 MRPL17Q9NRX2 175 aaKnown RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 DNAAF2Q9NVR5 837 aaKnown RBP5.49□□□□□ -1.53
CSTF1-207ENST00000498689 ZDHHC7Q9NXF8 308 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 GINS2Q9Y248 185 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 WASF2Q9Y6W5 498 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 ANK1P16157 1881 aa5.49□□□□□ -1.53
CSTF1-207ENST00000498689 APAF1O14727 1248 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 BRINP1O60477 761 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 RPS6KA5O75582 802 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 ADH1AP07327 375 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 CEBPBP17676 345 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 RPL17P18621 184 aaKnown RBP5.48□□□□□ -1.53
CSTF1-207ENST00000498689 MARK3P27448 753 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 ADRA1BP35368 520 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 GMPRP36959 345 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 WNT7BP56706 349 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 PPFIA1Q13136 1202 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 KARSQ15046 597 aaKnown RBP5.48□□□□□ -1.53
CSTF1-207ENST00000498689 LONRF3Q496Y0 759 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 IER5Q5VY09 327 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 LILRA6Q6PI73 481 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 DHRS13Q6UX07 377 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 ECHDC2Q86YB7 292 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 CERS3Q8IU89 383 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 SYT12Q8IV01 421 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 ARID3BQ8IVW6 561 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-207ENST00000498689 EHBP1Q8NDI1 1231 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 BAHD1Q8TBE0 780 aaPredicted RBP5.48□□□□□ -1.53
CSTF1-207ENST00000498689 TRAPPC12Q8WVT3 735 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 TMEM176AQ96HP8 235 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 RPS6KC1Q96S38 1066 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 PPP1R16BQ96T49 567 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 LGMNQ99538 433 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 DBNDD2Q9BQY9 259 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 GBP3Q9H0R5 595 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 ARMT1Q9H993 441 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 MLXIPQ9HAP2 919 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 CAPN10Q9HC96 672 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 MTMR4Q9NYA4 1195 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 PILRBQ9UKJ0 227 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 POLIQ9UNA4 740 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 MTMR7Q9Y216 660 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 CCDC171Q6TFL3 1326 aa5.48□□□□□ -1.53
CSTF1-207ENST00000498689 MXRA5Q9NR99 2828 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 FAM181BA6NEQ2 426 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 B4DLN1 442 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 E9PAM4 449 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 F8W810 466 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 SPECC1L-ADORA2AF8WAN1 911 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 CAPN5O15484 640 aaPredicted RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 PLA2G6O60733 806 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 EIF3JO75822 258 aaKnown RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 PRF1P14222 555 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 JUNDP17535 347 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 CTHP32929 405 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 VIPR2P41587 438 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 SLC1A4P43007 532 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 DGKEP52429 567 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 MRPL12P52815 198 aaKnown RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 GFPT1Q06210 699 aaPredicted RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 VAC14Q08AM6 782 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 UVSSAQ2YD98 709 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 FAM78AQ5JUQ0 283 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 AGMOQ6ZNB7 445 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms