RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TTLL13PA6NNM8 815 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 TULP1O00294 542 aaPredicted RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 N4BP3O15049 544 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 PIGRP01833 764 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 ITGB1P05556 798 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 ARF4P18085 180 aaPredicted RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 KCNA5P22460 613 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 CA8P35219 290 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 CYP2J2P51589 502 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 SNRPFP62306 86 aaKnown RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 FAM189BP81408 668 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 MYL5Q02045 173 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 ZBTB33Q86T24 672 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 CDR2LQ86X02 465 aaPredicted RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 COLGALT1Q8NBJ5 622 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 ENOX1Q8TC92 643 aaKnown RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 POMGNT1Q8WZA1 660 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 PGBD4Q96DM1 585 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 ZBTB45Q96K62 511 aaPredicted RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 UHRF1Q96T88 793 aaPredicted RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 BPIFA3Q9BQP9 254 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 PCIF1Q9H4Z3 704 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 FAM105AQ9NUU6 356 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 CGNQ9P2M7 1197 aaKnown RBP14.63□□□□□ -0.07
MSH6-208ENST00000493177 TRAF3IP3Q9Y228 551 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 INPP5FQ9Y2H2 1132 aa14.63□□□□□ -0.07
MSH6-208ENST00000493177 GOLGA6L19H0YKK7 550 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 CETN3O15182 167 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 CLDN3O15551 220 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 TOM1L1O75674 476 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 FGFR1OPO95684 399 aaKnown RBP14.62□□□□□ -0.07
MSH6-208ENST00000493177 NR3C1P04150 777 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 LINC00271P0C7V0 271 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 NR2F2P24468 414 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 RPL13P26373 211 aaKnown RBP14.62□□□□□ -0.07
MSH6-208ENST00000493177 AXLP30530 894 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 TPM4P67936 248 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 RNASELQ05823 741 aaKnown RBP14.62□□□□□ -0.07
MSH6-208ENST00000493177 ADAM9Q13443 819 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 ZNF568Q3ZCX4 644 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 SPATA1Q5VX52 437 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 SLFN12LQ6IEE8 588 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 TTI2Q6NXR4 508 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 SLC39A4Q6P5W5 647 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 NOTUMQ6P988 496 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 MPZL3Q6UWV2 235 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 APBB1IPQ7Z5R6 666 aaPredicted RBP14.62□□□□□ -0.07
MSH6-208ENST00000493177 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 CSGALNACT2Q8N6G5 542 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 ZNF558Q96NG5 402 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 CASD1Q96PB1 797 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 ADPGKQ9BRR6 497 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 CBWD1Q9BRT8 395 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 TRIM6Q9C030 488 aaPredicted RBP14.62□□□□□ -0.07
MSH6-208ENST00000493177 PDZD7Q9H5P4 517 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 AGPAT5Q9NUQ2 364 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 HCSTQ9UBK5 93 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 PUF60Q9UHX1 559 aaKnown RBP14.62□□□□□ -0.07
MSH6-208ENST00000493177 TNFSF13BQ9Y275 285 aa14.62□□□□□ -0.07
MSH6-208ENST00000493177 TDRD15B5MCY1 1934 aaKnown RBP14.61□□□□□ -0.07
MSH6-208ENST00000493177 NCK2O43639 380 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 EXOC3O60645 756 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 FGF18O76093 207 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 GARTP22102 1010 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 PPM1AP35813 382 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 FKBP3Q00688 224 aaKnown RBP14.61□□□□□ -0.07
MSH6-208ENST00000493177 KRT17Q04695 432 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 EDRF1Q3B7T1 1238 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 ZCWPW2Q504Y3 356 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 EEF1DP3Q658K8 133 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 CEP135Q66GS9 1140 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 GLB1LQ6UWU2 654 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 LUZP1Q86V48 1076 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 GAS2L3Q86XJ1 694 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 DHX40Q8IX18 779 aaKnown RBP14.61□□□□□ -0.07
MSH6-208ENST00000493177 SPPL3Q8TCT6 385 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 URGCPQ8TCY9 931 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 LPPQ93052 612 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 EEF2KMTQ96G04 330 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 MED15Q96RN5 788 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 DUSP9Q99956 384 aaKnown RBP14.61□□□□□ -0.07
MSH6-208ENST00000493177 MSTO1Q9BUK6 570 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 SRRTQ9BXP5 876 aaKnown RBP14.61□□□□□ -0.07
MSH6-208ENST00000493177 TLR9Q9NR96 1032 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 HSPBP1Q9NZL4 362 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 NFE2L3Q9Y4A8 694 aa14.61□□□□□ -0.07
MSH6-208ENST00000493177 GOLGA8IPA6NC78 632 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 GOLGA8JA6NMD2 632 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 IKBKBO14920 756 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 NPTXRO95502 500 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 ADSSP30520 456 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 ALDH7A1P49419 539 aaKnown RBP14.6□□□□□ -0.07
MSH6-208ENST00000493177 UBE3AQ05086 875 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 NOLC1Q14978 699 aaKnown RBP eCLIP14.6□□□□□ -0.07
MSH6-208ENST00000493177 IQCB1Q15051 598 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 DCAF4L1Q3SXM0 396 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 CLLU1OSQ5K130 101 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 KCNT2Q6UVM3 1135 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 RBM23Q86U06 439 aaKnown RBP14.6□□□□□ -0.07
MSH6-208ENST00000493177 XXYLT1Q8NBI6 393 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms