RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PLEKHA5Q9HAU0 1116 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 AGO2Q9UKV8 859 aaKnown RBP22.34■■□□□ 1.17
VARS-224ENST00000479051 STYXL1Q9Y6J8 313 aa22.34■■□□□ 1.17
VARS-224ENST00000479051 PLXNA4Q9HCM2 1894 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 ANKRD63C9JTQ0 380 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 DNAJB1P25685 340 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 PPP2R3AQ06190 1150 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 KCNA1Q09470 495 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 SEZ6Q53EL9 994 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 XKR4Q5GH76 650 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 GLRA4Q5JXX5 417 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 ALKAL1Q6UXT8 129 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 TMC7Q7Z402 723 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 DDX53Q86TM3 631 aaKnown RBP22.33■■□□□ 1.17
VARS-224ENST00000479051 TMEM87AQ8NBN3 555 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 TCF25Q9BQ70 676 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 NGRNQ9NPE2 291 aaKnown RBP22.33■■□□□ 1.17
VARS-224ENST00000479051 CNTN3Q9P232 1028 aa22.33■■□□□ 1.17
VARS-224ENST00000479051 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.33■■□□□ 1.17
VARS-224ENST00000479051 SMIM28A0A1B0GU29 152 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 RPN1P04843 607 aaKnown RBP22.32■■□□□ 1.16
VARS-224ENST00000479051 CXCL8P10145 99 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 KCNE1P15382 129 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 GARTP22102 1010 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 CAMK1Q14012 370 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 KMT5BQ4FZB7 885 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 TMEM173Q86WV6 379 aaPredicted RBP22.32■■□□□ 1.16
VARS-224ENST00000479051 ZNF507Q8TCN5 953 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 UROC1Q96N76 676 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 PPP1R10Q96QC0 940 aaKnown RBP22.32■■□□□ 1.16
VARS-224ENST00000479051 TSPAN18Q96SJ8 248 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 SLC39A2Q9NP94 309 aa22.32■■□□□ 1.16
VARS-224ENST00000479051 CITO14578 2027 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 CASTOR2A6NHX0 329 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 KIAA0391O15091 583 aaKnown RBP22.31■■□□□ 1.16
VARS-224ENST00000479051 XPOTO43592 962 aaKnown RBP22.31■■□□□ 1.16
VARS-224ENST00000479051 NCK2O43639 380 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 KLRC4O43908 158 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 LDHAP00338 332 aaKnown RBP22.31■■□□□ 1.16
VARS-224ENST00000479051 POU5F1Q01860 360 aaKnown RBP22.31■■□□□ 1.16
VARS-224ENST00000479051 HSP90AA2PQ14568 343 aaPredicted RBP22.31■■□□□ 1.16
VARS-224ENST00000479051 SMC1AQ14683 1233 aaKnown RBP22.31■■□□□ 1.16
VARS-224ENST00000479051 SLC10A6Q3KNW5 377 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 TCEAL5Q5H9L2 206 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 ARMCX5Q6P1M9 558 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 EPM2AIP1Q7L775 607 aaPredicted RBP22.31■■□□□ 1.16
VARS-224ENST00000479051 CD302Q8IX05 232 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 VPS52Q8N1B4 723 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 GLIS3Q8NEA6 775 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 ENGASEQ8NFI3 743 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 TIGD1Q96MW7 591 aa22.31■■□□□ 1.16
VARS-224ENST00000479051 FSD2A1L4K1 749 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 TISP43B9A030 160 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 FSCN2O14926 492 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 KINO60870 393 aaKnown RBP22.3■■□□□ 1.16
VARS-224ENST00000479051 TADA2AO75478 443 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 PRR29P0C7W0 189 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 CA8P35219 290 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 IRS1P35568 1242 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 TNFSF9P41273 254 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 ERVFC1P60507 584 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 DPYDQ12882 1025 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 PLPP4Q5VZY2 271 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 HS2ST1Q7LGA3 356 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 BCL7CQ8WUZ0 217 aaPredicted RBP22.3■■□□□ 1.16
VARS-224ENST00000479051 DDX27Q96GQ7 796 aaKnown RBP22.3■■□□□ 1.16
VARS-224ENST00000479051 CXCL16Q9H2A7 254 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 MARCH5Q9NX47 278 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 CPSF3Q9UKF6 684 aaKnown RBP22.3■■□□□ 1.16
VARS-224ENST00000479051 ADAM28Q9UKQ2 775 aa22.3■■□□□ 1.16
VARS-224ENST00000479051 TTC26A0AVF1 554 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 FAM189A1O60320 539 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 KIF20AO95235 890 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 ADSSP30520 456 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 ACOT2P49753 483 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 UBE2HP62256 183 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 SNRPFP62306 86 aaKnown RBP22.29■■□□□ 1.16
VARS-224ENST00000479051 SNW1Q13573 536 aaKnown RBP22.29■■□□□ 1.16
VARS-224ENST00000479051 ENOX2Q16206 610 aaKnown RBP22.29■■□□□ 1.16
VARS-224ENST00000479051 BMT2Q1RMZ1 405 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 ZBTB41Q5SVQ8 909 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 NELFCDQ8IXH7 590 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 SCFD1Q8WVM8 642 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 FAM212AQ96EL1 285 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 KIF12Q96FN5 646 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 IKZF4Q9H2S9 585 aa22.29■■□□□ 1.16
VARS-224ENST00000479051 SMC2O95347 1197 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 CTSAP10619 480 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 KCNB1Q14721 858 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 NAB2Q15742 525 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 KNOP1Q1ED39 458 aaKnown RBP22.28■■□□□ 1.16
VARS-224ENST00000479051 GOLGA5Q8TBA6 731 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 ZMAT2Q96NC0 199 aaKnown RBP22.28■■□□□ 1.16
VARS-224ENST00000479051 CDCA3Q99618 268 aaPredicted RBP22.28■■□□□ 1.16
VARS-224ENST00000479051 FAM213AQ9BRX8 229 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 ZBP1Q9H171 429 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 TLE6Q9H808 572 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 RMND1Q9NWS8 449 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 CGNQ9P2M7 1197 aaKnown RBP22.28■■□□□ 1.16
VARS-224ENST00000479051 COG5Q9UP83 839 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms