RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 FAM213AQ9BRX8 229 aa17.15■□□□□ 0.34
COL1A1-204ENST00000474644 NRDE2Q9H7Z3 1164 aa17.15■□□□□ 0.34
COL1A1-204ENST00000474644 DNAJB4Q9UDY4 337 aa17.15■□□□□ 0.34
COL1A1-204ENST00000474644 TTC26A0AVF1 554 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 GOLGA8IPA6NC78 632 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 GOLGA8JA6NMD2 632 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 EXTL3O43909 919 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 ZC3H11AO75152 810 aaKnown RBP eCLIP17.14■□□□□ 0.33
COL1A1-204ENST00000474644 DDHD2O94830 711 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 LDHAP00338 332 aaKnown RBP17.14■□□□□ 0.33
COL1A1-204ENST00000474644 BMPR1AP36894 532 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 PBX3P40426 434 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 CYP2J2P51589 502 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 DSC1Q08554 894 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 EPC2Q52LR7 807 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 GPD1LQ8N335 351 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
COL1A1-204ENST00000474644 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 PPP1R10Q96QC0 940 aaKnown RBP17.14■□□□□ 0.33
COL1A1-204ENST00000474644 RPF1Q9H9Y2 349 aaKnown RBP17.14■□□□□ 0.33
COL1A1-204ENST00000474644 PLEKHA5Q9HAU0 1116 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 TRAF3IP3Q9Y228 551 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 RALGAPA2Q2PPJ7 1873 aa17.14■□□□□ 0.33
COL1A1-204ENST00000474644 SMIM28A0A1B0GU29 152 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 EPOPA6NHQ4 379 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 C5orf67F2Z3F1 127 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 THP07101 528 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 ADRB2P07550 413 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 KCNE1P15382 129 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 CD44P16070 742 aaKnown RBP17.13■□□□□ 0.33
COL1A1-204ENST00000474644 KCNT2Q6UVM3 1135 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 Q7L0L9 218 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 BRSK2Q8IWQ3 736 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 COLGALT2Q8IYK4 626 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 FBXO22Q8NEZ5 403 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 ZMAT2Q96NC0 199 aaKnown RBP17.13■□□□□ 0.33
COL1A1-204ENST00000474644 ZNF558Q96NG5 402 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 PLVAPQ9BX97 442 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 AAASQ9NRG9 546 aa17.13■□□□□ 0.33
COL1A1-204ENST00000474644 RBAKQ9NYW8 714 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-204ENST00000474644 COL4A4P53420 1690 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-204ENST00000474644 LACTBL1A8MY62 500 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 CALUO43852 315 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-204ENST00000474644 NR3C1P04150 777 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 PTMSP20962 102 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 SLC11A1P49279 550 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 BCAR1P56945 870 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 POU5F1Q01860 360 aaKnown RBP17.12■□□□□ 0.33
COL1A1-204ENST00000474644 TUSC3Q13454 348 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 STIM1Q13586 685 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 GRIN2CQ14957 1233 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 CCDC183Q5T5S1 534 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
COL1A1-204ENST00000474644 CBWD2Q8IUF1 395 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 SLC9A9Q8IVB4 645 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 XXYLT1Q8NBI6 393 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 TMEM174Q8WUU8 243 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 FAM193BQ96PV7 902 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-204ENST00000474644 TMEM175Q9BSA9 504 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 PCDHB12Q9Y5F1 795 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 NLRC5Q86WI3 1866 aa17.12■□□□□ 0.33
COL1A1-204ENST00000474644 PPP1R3GB7ZBB8 358 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 PSMA7O14818 248 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 GALTP07902 379 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 PPM1AP35813 382 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 PPP1R2P41236 205 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 WNT7BP56706 349 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 SOX4Q06945 474 aaPredicted RBP17.11■□□□□ 0.33
COL1A1-204ENST00000474644 SPAG1Q07617 926 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 SNRNP35Q16560 246 aaKnown RBP17.11■□□□□ 0.33
COL1A1-204ENST00000474644 CENPPQ6IPU0 288 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
COL1A1-204ENST00000474644 CD302Q8IX05 232 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 SLC39A11Q8N1S5 342 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 GDPD5Q8WTR4 605 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 P2RX5Q93086 422 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 C11orf84Q9BUA3 381 aaPredicted RBP17.11■□□□□ 0.33
COL1A1-204ENST00000474644 PRDM12Q9H4Q4 367 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 KIAA1586Q9HCI6 787 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 DMAC2Q9NW81 257 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 TMEM63CQ9P1W3 806 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 CACNG4Q9UBN1 327 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 CDH23Q9H251 3354 aa17.11■□□□□ 0.33
COL1A1-204ENST00000474644 CASTOR2A6NHX0 329 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 NT5C1B-RDH14C9J2C7 533 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 H3BNC9 293 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 RFXAPO00287 272 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 EXOC3O60645 756 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 IL18RAPO95256 599 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms