RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 AFF1P51825 1210 aaKnown RBP16.47■□□□□ 0.23
SNX13-205ENST00000471744 PLCB3Q01970 1234 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 KRT17Q04695 432 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 STK4Q13043 487 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 TUSC3Q13454 348 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 KNOP1Q1ED39 458 aaKnown RBP16.47■□□□□ 0.23
SNX13-205ENST00000471744 ARMCX5Q6P1M9 558 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 ALKAL1Q6UXT8 129 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 ZNF280BQ86YH2 543 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 COLGALT2Q8IYK4 626 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 KLHL23Q8NBE8 558 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 GLIS3Q8NEA6 775 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 SPATA20Q8TB22 786 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 GDPD5Q8WTR4 605 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 MYLIPQ8WY64 445 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 TMEM169Q96HH4 297 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 HAPLN2Q9GZV7 340 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 MIOSQ9NXC5 875 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 CNTN3Q9P232 1028 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 HCSTQ9UBK5 93 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 PUF60Q9UHX1 559 aaKnown RBP16.47■□□□□ 0.23
SNX13-205ENST00000471744 PLAGL2Q9UPG8 496 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 FAN1Q9Y2M0 1017 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 ANK1P16157 1881 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 PTGESO14684 152 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 FAM189A1O60320 539 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 LPXNO60711 386 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 FGF18O76093 207 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 DDHD2O94830 711 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 ITGB1P05556 798 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 GALTP07902 379 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 ADSSP30520 456 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 PPP2R3AQ06190 1150 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 SLC39A11Q8N1S5 342 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 KIAA1586Q9HCI6 787 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 CPSF3Q9UKF6 684 aaKnown RBP16.46■□□□□ 0.23
SNX13-205ENST00000471744 PCDHA5Q9Y5H7 936 aa16.46■□□□□ 0.23
SNX13-205ENST00000471744 SMIM28A0A1B0GU29 152 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 TTC26A0AVF1 554 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 TISP43B9A030 160 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 XPOTO43592 962 aaKnown RBP16.45■□□□□ 0.22
SNX13-205ENST00000471744 ADRB2P07550 413 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 CXCL8P10145 99 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 IGFBP4P22692 258 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 HOXD13P35453 343 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 SLC11A1P49279 550 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
SNX13-205ENST00000471744 SLC10A6Q3KNW5 377 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 PDE12Q6L8Q7 609 aaKnown RBP16.45■□□□□ 0.22
SNX13-205ENST00000471744 NELFCDQ8IXH7 590 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 C12orf56Q8IXR9 622 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 GUF1Q8N442 669 aaKnown RBP16.45■□□□□ 0.22
SNX13-205ENST00000471744 SPPL3Q8TCT6 385 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
SNX13-205ENST00000471744 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 UROC1Q96N76 676 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
SNX13-205ENST00000471744 COLEC11Q9BWP8 271 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 ASB7Q9H672 318 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 DNAJB4Q9UDY4 337 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 STXBP5LQ9Y2K9 1186 aa16.45■□□□□ 0.22
SNX13-205ENST00000471744 CHD9Q3L8U1 2897 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 RFXAPO00287 272 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 PDXKO00764 312 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 EXTL3O43909 919 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 IL18RAPO95256 599 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 TNFSF9P41273 254 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 OR1G1P47890 313 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 ACOT2P49753 483 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 ADGRE1Q14246 886 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
SNX13-205ENST00000471744 SEZ6Q53EL9 994 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
SNX13-205ENST00000471744 GPD1LQ8N335 351 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 POF1BQ8WVV4 589 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 DDX27Q96GQ7 796 aaKnown RBP16.44■□□□□ 0.22
SNX13-205ENST00000471744 CBWD1Q9BRT8 395 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
SNX13-205ENST00000471744 AGPAT3Q9NRZ7 376 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 DERAQ9Y315 318 aa16.44■□□□□ 0.22
SNX13-205ENST00000471744 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 SZT2Q5T011 3432 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 NRP1O14786 923 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 GRM6O15303 877 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 B4GALT3O60512 393 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 PBX3P40426 434 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 PPP1R2P41236 205 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 NAB2Q15742 525 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 GLRA4Q5JXX5 417 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 DDX53Q86TM3 631 aaKnown RBP16.43■□□□□ 0.22
SNX13-205ENST00000471744 NT5DC4Q86YG4 428 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 TMEM174Q8WUU8 243 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 PPP2R3CQ969Q6 453 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 FAM213AQ9BRX8 229 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 IKZF4Q9H2S9 585 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms