RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 USP45Q70EL2 814 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 AMER2Q8N7J2 671 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 OR2I1PQ8NGU4 316 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 ZNF483Q8TF39 744 aaPredicted RBP6.55□□□□□ -1.36
LSM5-209ENST00000468872 RIN2Q8WYP3 895 aaPredicted RBP6.55□□□□□ -1.36
LSM5-209ENST00000468872 DPF2Q92785 391 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 MVB12AQ96EY5 273 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 ADI1Q9BV57 179 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 SAP30BPQ9UHR5 308 aaKnown RBP6.55□□□□□ -1.36
LSM5-209ENST00000468872 INTUQ9ULD6 942 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 KRT18P05783 430 aaKnown RBP6.54□□□□□ -1.36
LSM5-209ENST00000468872 MYBP10242 640 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 GAAP10253 952 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 GSPT1P15170 499 aaKnown RBP6.54□□□□□ -1.36
LSM5-209ENST00000468872 MAN2A2P49641 1150 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 CNGB1Q14028 1251 aaPredicted RBP6.54□□□□□ -1.36
LSM5-209ENST00000468872 MAN2A1Q16706 1144 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 GSPT2Q8IYD1 628 aaKnown RBP6.54□□□□□ -1.36
LSM5-209ENST00000468872 GRAMD1CQ8IYS0 662 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 CMTM4Q8IZR5 234 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 PIK3C3Q8NEB9 887 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 MAP3K14Q99558 947 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 ACO2Q99798 780 aaKnown RBP6.54□□□□□ -1.36
LSM5-209ENST00000468872 C1orf112Q9NSG2 853 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 RBM12Q9NTZ6 932 aaKnown RBP6.54□□□□□ -1.36
LSM5-209ENST00000468872 NCDNQ9UBB6 729 aa6.54□□□□□ -1.36
LSM5-209ENST00000468872 A6NNZ2 444 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 CTNND1O60716 968 aaKnown RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 FSBPO95073 299 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 MYL1P05976 194 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 LTA4HP09960 611 aaKnown RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 CTSSP25774 331 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 MGAT2Q10469 447 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 IL10RAQ13651 578 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 SEPT2Q15019 361 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 NOMO1Q15155 1222 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 CYB5RLQ6IPT4 315 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 MFSD5Q6N075 450 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 ABHD15Q6UXT9 468 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 CCAR1Q8IX12 1150 aaKnown RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 ELOA2Q8IYF1 753 aaPredicted RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 UNC5BQ8IZJ1 945 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 ZBTB34Q8NCN2 500 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 GPR156Q8NFN8 814 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 NEU4Q8WWR8 484 aaPredicted RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 HOXB13Q92826 284 aaPredicted RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 PAWRQ96IZ0 340 aaKnown RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 ZNF512Q96ME7 567 aaPredicted RBP6.53□□□□□ -1.36
LSM5-209ENST00000468872 GPR87Q9BY21 358 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 PCGF6Q9BYE7 350 aa6.53□□□□□ -1.36
LSM5-209ENST00000468872 FRMPD2Q68DX3 1309 aaPredicted RBP6.52□□□□□ -1.37
LSM5-209ENST00000468872 MTSS1O43312 755 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 DTNBO60941 627 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 ADH4P08319 380 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 MAKP20794 623 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 RABGGTBP53611 331 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 NPEPPSP55786 919 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 SLC25A3Q00325 362 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 MEF2AQ02078 507 aaPredicted RBP6.52□□□□□ -1.37
LSM5-209ENST00000468872 DPTQ07507 201 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 UBE3CQ15386 1083 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 PGS1Q32NB8 556 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 CRB2Q5IJ48 1285 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 KSR2Q6VAB6 950 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
LSM5-209ENST00000468872 PPP1R35Q8TAP8 253 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 KAT5Q92993 513 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 HDAC10Q969S8 669 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 ARL8AQ96BM9 186 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 CHFRQ96EP1 664 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 UIMC1Q96RL1 719 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 SLC2A4RGQ9NR83 387 aa6.52□□□□□ -1.37
LSM5-209ENST00000468872 REXO2Q9Y3B8 237 aaKnown RBP6.52□□□□□ -1.37
LSM5-209ENST00000468872 KLRG2A4D1S0 409 aaPredicted RBP6.51□□□□□ -1.37
LSM5-209ENST00000468872 AKR1B10O60218 316 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 PRAMEF4O60810 478 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 PEX11BO96011 259 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 TOB2Q14106 344 aaPredicted RBP6.51□□□□□ -1.37
LSM5-209ENST00000468872 OVCH2Q7RTZ1 564 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 SNX33Q8WV41 574 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 LARP4BQ92615 738 aaKnown RBP6.51□□□□□ -1.37
LSM5-209ENST00000468872 C1GALT1C1Q96EU7 318 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 FAM193BQ96PV7 902 aaPredicted RBP6.51□□□□□ -1.37
LSM5-209ENST00000468872 CHST12Q9NRB3 414 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 ING3Q9NXR8 418 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 PCDHA13Q9Y5I0 950 aa6.51□□□□□ -1.37
LSM5-209ENST00000468872 XDHP47989 1333 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 RPTORQ8N122 1335 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 WDR33Q9C0J8 1336 aaKnown RBP6.5□□□□□ -1.37
LSM5-209ENST00000468872 MFAP3LO75121 409 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 STC2O76061 302 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 TRIM27P14373 513 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 ADSLP30566 484 aaPredicted RBP6.5□□□□□ -1.37
LSM5-209ENST00000468872 SLC6A9P48067 706 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 USP14P54578 494 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 DSC2Q02487 901 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 C1QL3Q5VWW1 255 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 Q6ZVL8 140 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 HTR3DQ70Z44 454 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 MIGA2Q7L4E1 593 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms