RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ELAC2Q9BQ52 826 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 NAA15Q9BXJ9 866 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 BHMT2Q9H2M3 363 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 SEC61A2Q9H9S3 476 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 GNL3LQ9NVN8 582 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 AJAP1Q9UKB5 411 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 TPCN1Q9ULQ1 816 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 RIPOR2Q9Y4F9 1068 aa5.47□□□□□ -1.53
CDC42BPA-211ENST00000466538 CFAP69A5D8W1 941 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 FOXN3O00409 490 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 NOBOXO60393 691 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 PQBP1O60828 265 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 EIF3JO75822 258 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 SLC5A1P13866 664 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 ALOX15P16050 662 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 CASRP41180 1078 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 MRPL49Q13405 166 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 PLS1Q14651 629 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 PRAMEF14Q5SWL7 426 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 ADGRE4PQ86SQ3 457 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZDHHC14Q8IZN3 488 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 LGI4Q8N135 537 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZGPATQ8N5A5 531 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 PLBD2Q8NHP8 589 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 MORC4Q8TE76 937 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 CFHR4Q92496 578 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 IL17RAQ96F46 866 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 APIPQ96GX9 242 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 NELFAQ9H3P2 528 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 MYH16Q9H6N6 1097 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 SARS2Q9NP81 518 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 IL23AQ9NPF7 189 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 ABCF2Q9UG63 623 aa5.46□□□□□ -1.54
CDC42BPA-211ENST00000466538 LRRC14BA6NHZ5 514 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 ISM1B1AKI9 464 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 NT5C1B-RDH14C9J2C7 533 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 PJA2O43164 708 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 MTHFD1P11586 935 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 MYF5P13349 255 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 PEX2P28328 305 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 PPP2CBP62714 309 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 PPP2CAP67775 309 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 VMACQ2NL98 169 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 FLYWCH1Q4VC44 716 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 DACT2Q5SW24 774 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 PLXDC1Q8IUK5 500 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 SMC5Q8IY18 1101 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 REPS2Q8NFH8 660 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 MDM1Q8TC05 714 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 STON2Q8WXE9 905 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 ANKS1AQ92625 1134 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 GJA10Q969M2 543 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 MYD88Q99836 296 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 TCF25Q9BQ70 676 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 LRRC27Q9C0I9 530 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 BTBD1Q9H0C5 482 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 LDAHQ9H6V9 325 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 CNNM1Q9NRU3 951 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 FEZ2Q9UHY8 353 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 PHTF1Q9UMS5 762 aa5.45□□□□□ -1.54
CDC42BPA-211ENST00000466538 A0A1W2PPL8 197 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 UBE2QL1A1L167 161 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 HOXA3O43365 443 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 B4GALT3O60512 393 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 PCSK1P29120 753 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 PRDX5P30044 214 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 CREMQ03060 361 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 IFIT5Q13325 482 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 RIN1Q13671 783 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 ACAP1Q15027 740 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 PABPC1LQ4VXU2 614 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 SWSAP1Q6NVH7 229 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 ARHGEF18Q6ZSZ5 1173 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 TOGARAM2Q6ZUX3 1019 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 SEM1Q6ZVN7 128 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 DPP9Q86TI2 863 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 SHCBP1Q8NEM2 672 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 IL17RDQ8NFM7 739 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 NLGN4YQ8NFZ3 816 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 BRIX1Q8TDN6 353 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 PHKBQ93100 1093 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 SUCLG2Q96I99 432 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 C22orf23Q9BZE7 217 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 C11orf54Q9H0W9 315 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 ARMT1Q9H993 441 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 NLRC4Q9NPP4 1024 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 PIH1D1Q9NWS0 290 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 NCDNQ9UBB6 729 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 ACTL7AQ9Y615 435 aa5.44□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZMYM3Q14202 1370 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 A0A1W2PRX2 142 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 B5MCH6 92 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 F2RL2O00254 374 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 MATN2O00339 956 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 CNOT4O95628 575 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 SNRPA1P09661 255 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 CR2P20023 1033 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms