RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 FAM187BQ17R55 369 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 SCLYQ96I15 445 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 WNT8AQ9H1J5 351 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 AGO3Q9H9G7 860 aaKnown RBP19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 PCDH10Q9P2E7 1040 aa19.57■□□□□ 0.72
ATPAF2-202ENST00000462733 A0A0U1RQJ8 604 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CTAGE15A4D2H0 777 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TRIM43BA6NCK2 446 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 EIF3CLB5ME19 914 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ANKRD63C9JTQ0 380 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 PES1O00541 588 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CLIC2O15247 247 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 IPO7O95373 1038 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CTAGE8P0CG41 777 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TRIM21P19474 475 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CD52P31358 61 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 MIIPQ5JXC2 388 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 WDR59Q6PJI9 974 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 HS2ST1Q7LGA3 356 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CTAGE6Q86UF2 777 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CDR2LQ86X02 465 aaPredicted RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CTAGE4Q8IX94 777 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ATRIPQ8WXE1 791 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TRIM43Q96BQ3 446 aaPredicted RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 EIF3CQ99613 913 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CHP1Q99653 195 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ACO2Q99798 780 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TYW1Q9NV66 732 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ST3GAL5Q9UNP4 418 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TANC1Q9C0D5 1861 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CNTNAP2Q9UHC6 1331 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 CALUO43852 315 aaPredicted RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ERLIN1O75477 346 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 HNRNPH3P31942 346 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 MATR3P43243 847 aaKnown RBP eCLIP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 PAK2Q13177 524 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ATF7IP2Q5U623 682 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 SLC39A4Q6P5W5 647 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TSHZ1Q6ZSZ6 1077 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ZBTB45Q96K62 511 aaPredicted RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TSG101Q99816 390 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 AGPAT3Q9NRZ7 376 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 ANKFY1Q9P2R3 1169 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 MYO6Q9UM54 1294 aa19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 PIN4Q9Y237 131 aaKnown RBP19.56■□□□□ 0.72
ATPAF2-202ENST00000462733 TET1Q8NFU7 2136 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 PDXKO00764 312 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 GPR182O15218 404 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 KRT86O43790 486 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 PIGRP01833 764 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 ZPBP2Q6X784 338 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 C7orf61Q8IZ16 206 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 TCHPQ9BT92 498 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 HTATIP2Q9BUP3 242 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 TSGA10Q9BZW7 698 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 AGPAT5Q9NUQ2 364 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 PADI3Q9ULW8 664 aa19.55■□□□□ 0.72
ATPAF2-202ENST00000462733 KIAA0355O15063 1070 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 NBNO60934 754 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 HARSP12081 509 aaKnown RBP19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 RAG1P15918 1043 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 PCBP1Q15365 356 aaKnown RBP eCLIP19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ZCWPW2Q504Y3 356 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ZNF771Q7L3S4 317 aaPredicted RBP19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ZBTB33Q86T24 672 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 USP38Q8NB14 1042 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 EEF2KMTQ96G04 330 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 RPGRIP1Q96KN7 1286 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 CBWD1Q9BRT8 395 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 EDEM3Q9BZQ6 932 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 PCIF1Q9H4Z3 704 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ERVK-5Q9HDB9 667 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 TRAF3IP3Q9Y228 551 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 SQORQ9Y6N5 450 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ANO9A1A5B4 782 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 TIMP1P01033 207 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ITGB8P26012 769 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ADSSP30520 456 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 HOXA11P31270 313 aaPredicted RBP19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 GPNMBQ14956 572 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 MAN2A1Q16706 1144 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 EEF1DP3Q658K8 133 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 TRAPPC11Q7Z392 1133 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 GOLGA5Q8TBA6 731 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 POMGNT1Q8WZA1 660 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 FUT8Q9BYC5 575 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 IFIH1Q9BYX4 1025 aaKnown RBP19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 PDZD7Q9H5P4 517 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 ANKZF1Q9H8Y5 726 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 PRKAG2Q9UGJ0 569 aa19.54■□□□□ 0.72
ATPAF2-202ENST00000462733 TOM1L1O75674 476 aa19.53■□□□□ 0.72
ATPAF2-202ENST00000462733 SEC31AO94979 1220 aaKnown RBP19.53■□□□□ 0.72
ATPAF2-202ENST00000462733 NR3C1P04150 777 aa19.53■□□□□ 0.72
ATPAF2-202ENST00000462733 CYP2J2P51589 502 aa19.53■□□□□ 0.72
ATPAF2-202ENST00000462733 ZNF568Q3ZCX4 644 aa19.53■□□□□ 0.72
ATPAF2-202ENST00000462733 VWA3BQ502W6 1294 aa19.53■□□□□ 0.72
ATPAF2-202ENST00000462733 NOTUMQ6P988 496 aa19.53■□□□□ 0.72
ATPAF2-202ENST00000462733 DEFB128Q7Z7B8 93 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms