RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ZMAT2Q96NC0 199 aaKnown RBP15.4■□□□□ 0.06
SMPD4-215ENST00000457039 PPP1R10Q96QC0 940 aaKnown RBP15.4■□□□□ 0.06
SMPD4-215ENST00000457039 RPS6KC1Q96S38 1066 aa15.4■□□□□ 0.06
SMPD4-215ENST00000457039 PLVAPQ9BX97 442 aa15.4■□□□□ 0.06
SMPD4-215ENST00000457039 GTPBP4Q9BZE4 634 aaKnown RBP15.4■□□□□ 0.06
SMPD4-215ENST00000457039 PLEKHA5Q9HAU0 1116 aa15.4■□□□□ 0.06
SMPD4-215ENST00000457039 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
SMPD4-215ENST00000457039 DNAJB4Q9UDY4 337 aa15.4■□□□□ 0.06
SMPD4-215ENST00000457039 MAPK8IP1Q9UQF2 711 aa15.4■□□□□ 0.06
SMPD4-215ENST00000457039 SMIM28A0A1B0GU29 152 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 PDXKO00764 312 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 LPXNO60711 386 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 MBD3O95983 291 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 THP07101 528 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 GALTP07902 379 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 PBX3P40426 434 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 PRCPP42785 496 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 BCAR1P56945 870 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 RNASELQ05823 741 aaKnown RBP15.39■□□□□ 0.05
SMPD4-215ENST00000457039 GLRA4Q5JXX5 417 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 KCNT2Q6UVM3 1135 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 HS2ST1Q7LGA3 356 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 DEFB123Q8N688 67 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 FBXO22Q8NEZ5 403 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 GOLGA5Q8TBA6 731 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 SAAL1Q96ER3 474 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 TMEM175Q9BSA9 504 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 NUP62CLQ9H1M0 184 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 PCIF1Q9H4Z3 704 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 RPF1Q9H9Y2 349 aaKnown RBP15.39■□□□□ 0.05
SMPD4-215ENST00000457039 AAASQ9NRG9 546 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 HSPBP1Q9NZL4 362 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 TRAF3IP3Q9Y228 551 aa15.39■□□□□ 0.05
SMPD4-215ENST00000457039 LACTBL1A8MY62 500 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 H3BNC9 293 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 RFXAPO00287 272 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 CLIC2O15247 247 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 EXTL3O43909 919 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 ZC3H11AO75152 810 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMPD4-215ENST00000457039 LDHAP00338 332 aaKnown RBP15.38■□□□□ 0.05
SMPD4-215ENST00000457039 SLC11A1P49279 550 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 TUSC3Q13454 348 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 NFIL3Q16649 462 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 ZCWPW2Q504Y3 356 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 SPOUT1Q5T280 376 aaKnown RBP15.38■□□□□ 0.05
SMPD4-215ENST00000457039 SLC9A9Q8IVB4 645 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 BRSK2Q8IWQ3 736 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 ADSSL1Q8N142 457 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 SLC39A11Q8N1S5 342 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 GPD1LQ8N335 351 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 TRIML1Q8N9V2 468 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 KLHL23Q8NBE8 558 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 FAM161BQ96MY7 647 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 ZNF558Q96NG5 402 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 GUCD1Q96NT3 240 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 FAM193BQ96PV7 902 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-215ENST00000457039 FAM213AQ9BRX8 229 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 PRDM12Q9H4Q4 367 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 DMAC2Q9NW81 257 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 MTMR10Q9NXD2 777 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 PCDHB12Q9Y5F1 795 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 TDRD15B5MCY1 1934 aaKnown RBP15.38■□□□□ 0.05
SMPD4-215ENST00000457039 CITO14578 2027 aa15.38■□□□□ 0.05
SMPD4-215ENST00000457039 TRIP11Q15643 1979 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 CARNS1A5YM72 827 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 GOLGA8IPA6NC78 632 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 GOLGA8JA6NMD2 632 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 ITGB1P05556 798 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
SMPD4-215ENST00000457039 WNT7BP56706 349 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 PPP2R3AQ06190 1150 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 SOX4Q06945 474 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-215ENST00000457039 MYBPC2Q14324 1141 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 ZBTB6Q15916 424 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 ISM2Q6H9L7 571 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 CENPPQ6IPU0 288 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 RBM43Q6ZSC3 357 aaKnown RBP15.37■□□□□ 0.05
SMPD4-215ENST00000457039 TMEM173Q86WV6 379 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-215ENST00000457039 CBWD2Q8IUF1 395 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 CD302Q8IX05 232 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 GDPD5Q8WTR4 605 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 C11orf84Q9BUA3 381 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-215ENST00000457039 ASB7Q9H672 318 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 MARCH5Q9NX47 278 aa15.37■□□□□ 0.05
SMPD4-215ENST00000457039 COL4A4P53420 1690 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-215ENST00000457039 PDCD11Q14690 1871 aaKnown RBP15.37■□□□□ 0.05
SMPD4-215ENST00000457039 ANK1P16157 1881 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 PPP1R3GB7ZBB8 358 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 NT5C1B-RDH14C9J2C7 533 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 BIN1O00499 593 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 NRP1O14786 923 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 FGF18O76093 207 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 EFEMP2O95967 443 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 ALDH2P05091 517 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 PPM1AP35813 382 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 ALDH7A1P49419 539 aaKnown RBP15.36■□□□□ 0.05
SMPD4-215ENST00000457039 GPM6BQ13491 265 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 ADGRE1Q14246 886 aa15.36■□□□□ 0.05
SMPD4-215ENST00000457039 XXYLT1Q8NBI6 393 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms