RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ATG16L2Q8NAA4 619 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 GRK7Q8WTQ7 553 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBR3-206ENST00000444475 NRBF2Q96F24 287 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 APIPQ96GX9 242 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 GBP4Q96PP9 640 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 METTL22Q9BUU2 404 aaPredicted RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 PHF20Q9BVI0 1012 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 SMARCAD1Q9H4L7 1026 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CYP4F12Q9HCS2 524 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 MID1IP1Q9NPA3 183 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 GPR108Q9NPR9 543 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 NINJ2Q9NZG7 142 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CACNG4Q9UBN1 327 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 RASAL2Q9UJF2 1139 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 MOSPD1Q9UJG1 213 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 FEM1BQ9UK73 627 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CORO2BQ9UQ03 480 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 KIF3AQ9Y496 699 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 AP1M2Q9Y6Q5 423 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ANKRD34BA5PLL1 514 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 POP4O95707 220 aaKnown RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 RFC1P35251 1148 aaPredicted RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 TCF7P36402 384 aaPredicted RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 SART3Q15020 963 aaKnown RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 HHIPL2Q6UWX4 724 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CEP70Q8NHQ1 597 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ETNPPLQ8TBG4 499 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 IFI44Q8TCB0 444 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 RUNDC3BQ96NL0 473 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 TXN2Q99757 166 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 MIR1-1HGQ9H1L0 117 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 MRPL44Q9H9J2 332 aaKnown RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 ERVMER34-1Q9H9K5 563 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ACTR3BQ9P1U1 418 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 SAMD15Q9P1V8 674 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 DNAJB9Q9UBS3 223 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 BACE2Q9Y5Z0 518 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ARHGAP10A1A4S6 786 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 KRT87PA6NCN2 255 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 F8W8V4 182 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ERVH48-1M5A8F1 160 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 KERAO60938 352 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 NME1P15531 152 aaKnown RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 PDCP20941 246 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 IL10P22301 178 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CHMP24386 653 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 HTR1BP28222 390 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 TLX1P31314 330 aaPredicted RBP4.29□□□□□ -1.72
UBR3-206ENST00000444475 MLH1P40692 756 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 DPP6P42658 865 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 FAAP100Q0VG06 881 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 TRPC3Q13507 836 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 CUL2Q13617 745 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 DUSP28Q4G0W2 176 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 MSS51Q4VC12 460 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 SFMBT2Q5VUG0 894 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ADGRA1Q86SQ6 560 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 WDR49Q8IV35 697 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 PEX5LQ8IYB4 626 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 GRIN3AQ8TCU5 1115 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ST8SIA4Q92187 359 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 C1orf159Q96HA4 380 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 TIGD1Q96MW7 591 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 SLC9A7Q96T83 725 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 PTPN18Q99952 460 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ITPAQ9BY32 194 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 OBP2BQ9NPH6 170 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 SEC31BQ9NQW1 1179 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 TMEM39AQ9NV64 488 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 NMRK1Q9NWW6 199 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 SPATA7Q9P0W8 599 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 KIAA1468Q9P260 1216 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 B4GALT6Q9UBX8 382 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 RPS6KA6Q9UK32 745 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 ATP11BQ9Y2G3 1177 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 HIF3AQ9Y2N7 669 aa4.29□□□□□ -1.72
UBR3-206ENST00000444475 GOLGA6L7A0A1B0GV03 622 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SH2B2O14492 632 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 ARHGAP6O43182 974 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TMIGD3P0DMS9 266 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 ZSCAN22P10073 491 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 MTNR1BP49286 362 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 HADHBP55084 474 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 CHRNDQ07001 517 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 STK11Q15831 433 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CLEC16AQ2KHT3 1053 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 LRRFIP1Q32MZ4 808 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 FAM26FQ5R3K3 315 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 AADACL4Q5VUY2 407 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 DENND5AQ6IQ26 1287 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 BBS12Q6ZW61 710 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 MON1AQ86VX9 555 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TTC39CQ8N584 583 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 FAM133AQ8N9E0 248 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 OR56B2PQ8NGI1 322 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 FAM216AQ8WUB2 273 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ANKS1AQ92625 1134 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SLC5A5Q92911 643 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TRIM47Q96LD4 638 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms