RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PSMD5Q16401 504 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 UVSSAQ2YD98 709 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 POTEHQ6S545 545 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 NEK8Q86SG6 692 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 SKAP1Q86WV1 359 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 NPAS3Q8IXF0 933 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 KXD1Q9BQD3 176 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 RTKNQ9BST9 563 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 PHF20Q9BVI0 1012 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 FAM126AQ9BYI3 521 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-208ENST00000443046 KLK14Q9P0G3 267 aa15.99■□□□□ 0.15
HMGN1-208ENST00000443046 DNMT3BQ9UBC3 853 aaKnown RBP15.99■□□□□ 0.15
HMGN1-208ENST00000443046 PTGESO14684 152 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 TBC1D4O60343 1298 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 XYLBO75191 536 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 ECI2O75521 394 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 KIF4AO95239 1232 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 NPTXRO95502 500 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 GLRA2P23416 452 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 IRX6P78412 446 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-208ENST00000443046 RAB33AQ14088 237 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 FAM171A1Q5VUB5 890 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 MAMSTRQ6ZN01 415 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 RTL10Q7L3V2 364 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 CDR2LQ86X02 465 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-208ENST00000443046 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
HMGN1-208ENST00000443046 HSD17B14Q9BPX1 270 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 PARD6AQ9NPB6 346 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 HCFC1R1Q9NWW0 138 aa15.98■□□□□ 0.15
HMGN1-208ENST00000443046 FRYQ5TBA9 3013 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 DGAT1O75907 488 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 CYP4A11Q02928 519 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 AXDND1Q5T1B0 1012 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-208ENST00000443046 PDXDC1Q6P996 788 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 TSSK4Q6SA08 328 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 SLC7A14Q8TBB6 771 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 HASPINQ8TF76 798 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 SECISBP2LQ93073 1101 aaKnown RBP15.97■□□□□ 0.15
HMGN1-208ENST00000443046 PLA2G2FQ9BZM2 168 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 CXCL16Q9H2A7 254 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 AVENQ9NQS1 362 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-208ENST00000443046 ANKEF1Q9NU02 776 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 PARP2Q9UGN5 583 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 KCNJ14Q9UNX9 436 aa15.97■□□□□ 0.15
HMGN1-208ENST00000443046 CASTOR2A6NHX0 329 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 NCAM2O15394 837 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 ADRB1P08588 477 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 PSMA5P28066 241 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 ADCY1Q08828 1119 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 ELAVL2Q12926 359 aaKnown RBP15.96■□□□□ 0.15
HMGN1-208ENST00000443046 MTAPQ13126 283 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 PABPC1LQ4VXU2 614 aaKnown RBP15.96■□□□□ 0.15
HMGN1-208ENST00000443046 NCAPH2Q6IBW4 605 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 ZNF852Q6ZMS4 543 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 TPRG1Q6ZUI0 275 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 TPH2Q8IWU9 490 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 ZNF274Q96GC6 653 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-208ENST00000443046 PRIMPOLQ96LW4 560 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 GDE1Q9NZC3 331 aa15.96■□□□□ 0.15
HMGN1-208ENST00000443046 CDV3Q9UKY7 258 aaKnown RBP15.96■□□□□ 0.15
HMGN1-208ENST00000443046 CCDC194A0A1B0GVG4 234 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 DCDC2BA2VCK2 349 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 CCNT1O60563 726 aaKnown RBP15.95■□□□□ 0.14
HMGN1-208ENST00000443046 FGFR3P22607 806 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 FAM187BQ17R55 369 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 SLC5A9Q2M3M2 681 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.95■□□□□ 0.14
HMGN1-208ENST00000443046 RUFY3Q7L099 469 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 CEP57Q86XR8 500 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 SLFN12Q8IYM2 578 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 NAP1L4Q99733 375 aaKnown RBP15.95■□□□□ 0.14
HMGN1-208ENST00000443046 EIF2AK1Q9BQI3 630 aaKnown RBP15.95■□□□□ 0.14
HMGN1-208ENST00000443046 FZD8Q9H461 694 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 ZSWIM6Q9HCJ5 1215 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 HEBP1Q9NRV9 189 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 MTRRQ9UBK8 725 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 POLIQ9UNA4 740 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 ZZEF1O43149 2961 aa15.95■□□□□ 0.14
HMGN1-208ENST00000443046 COL4A2P08572 1712 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 TTLL13PA6NNM8 815 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 THP07101 528 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 IGFBP6P24592 240 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-208ENST00000443046 OR1D2P34982 312 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 RARRES1P49788 294 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 EARS2Q5JPH6 523 aaKnown RBP15.94■□□□□ 0.14
HMGN1-208ENST00000443046 CDCA2Q69YH5 1023 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-208ENST00000443046 TANGO2Q6ICL3 276 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 CD300LGQ6UXG3 332 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 DNASE1L2Q92874 299 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 ELSPBP1Q96BH3 223 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 CHRDQ9H2X0 955 aa15.94■□□□□ 0.14
HMGN1-208ENST00000443046 PRMT7Q9NVM4 692 aaPredicted RBP15.94■□□□□ 0.14
HMGN1-208ENST00000443046 MRPS17Q9Y2R5 130 aaKnown RBP15.94■□□□□ 0.14
HMGN1-208ENST00000443046 TMEM189-UBE2V1I3L0A0 370 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 CPLX1O14810 134 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 FCARP24071 287 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 OXER1Q8TDS5 423 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 ING5Q8WYH8 240 aa15.93■□□□□ 0.14
HMGN1-208ENST00000443046 MCRS1Q96EZ8 462 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms