RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PTPRSQ13332 1948 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 UBE4BO95155 1302 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 TMEM265A0A087WTH1 108 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 SMIM28A0A1B0GU29 152 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 EPOPA6NHQ4 379 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 CASTOR2A6NHX0 329 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 LACTBL1A8MY62 500 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 TGFB1I1O43294 461 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 SLC11A1P49279 550 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 KRT17Q04695 432 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 STIM1Q13586 685 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 ENOX2Q16206 610 aaKnown RBP15.85■□□□□ 0.13
SGCE-204ENST00000428696 KLHL10Q6JEL2 608 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 GPR153Q6NV75 609 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 MICALL1Q8N3F8 863 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 ZSWIM2Q8NEG5 633 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 GOLGA5Q8TBA6 731 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 MICAL1Q8TDZ2 1067 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 CLP1Q92989 425 aaKnown RBP15.85■□□□□ 0.13
SGCE-204ENST00000428696 KIF12Q96FN5 646 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 GAS2L1Q99501 681 aaPredicted RBP15.85■□□□□ 0.13
SGCE-204ENST00000428696 SPG21Q9NZD8 308 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 HSPBP1Q9NZL4 362 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 KIAA1468Q9P260 1216 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 STYXL1Q9Y6J8 313 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 ZMYM2Q9UBW7 1377 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 PTGESO14684 152 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 NRP1O14786 923 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 CALUO43852 315 aaPredicted RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 EXTL3O43909 919 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 EXOC3O60645 756 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 FGF18O76093 207 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 LDHAP00338 332 aaKnown RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 RB1P06400 928 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 PRCPP42785 496 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 GRIK3Q13003 919 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 CEP135Q66GS9 1140 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 GSTCDQ8NEC7 633 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 MYLIPQ8WY64 445 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 RSPH1Q8WYR4 309 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 SNX27Q96L92 541 aa15.84■□□□□ 0.13
SGCE-204ENST00000428696 CDX2Q99626 313 aaPredicted RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 C11orf84Q9BUA3 381 aaPredicted RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 RBAKQ9NYW8 714 aaPredicted RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 CPSF3Q9UKF6 684 aaKnown RBP15.84■□□□□ 0.13
SGCE-204ENST00000428696 ZNF233A6NK53 670 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 B4GALT3O60512 393 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 TADA2AO75478 443 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 MBD3O95983 291 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 GALTP07902 379 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 BMT2Q1RMZ1 405 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 GPD1LQ8N335 351 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 GUF1Q8N442 669 aaKnown RBP15.83■□□□□ 0.12
SGCE-204ENST00000428696 XXYLT1Q8NBI6 393 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 SPATA20Q8TB22 786 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 HASPINQ8TF76 798 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 PPM1EQ8WY54 764 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 TMEM169Q96HH4 297 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 ZMAT2Q96NC0 199 aaKnown RBP15.83■□□□□ 0.12
SGCE-204ENST00000428696 COLEC11Q9BWP8 271 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 PLVAPQ9BX97 442 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 PLEKHA5Q9HAU0 1116 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 SLC38A7Q9NVC3 462 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 MTMR10Q9NXD2 777 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 SZT2Q5T011 3432 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 GBF1Q92538 1859 aa15.83■□□□□ 0.12
SGCE-204ENST00000428696 H3BNC9 293 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 GRM6O15303 877 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 PPM1AP35813 382 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 TUSC3Q13454 348 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 JADE1Q6IE81 842 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 ALKAL1Q6UXT8 129 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 CBWD2Q8IUF1 395 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 COLGALT2Q8IYK4 626 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 CCDC127Q96BQ5 260 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 EEF2KMTQ96G04 330 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 TSG101Q99816 390 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 GTPBP4Q9BZE4 634 aaKnown RBP15.82■□□□□ 0.12
SGCE-204ENST00000428696 KCTD10Q9H3F6 313 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 GOLGA2P5Q9HBQ8 144 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 CGNQ9P2M7 1197 aaKnown RBP15.82■□□□□ 0.12
SGCE-204ENST00000428696 CHD9Q3L8U1 2897 aa15.82■□□□□ 0.12
SGCE-204ENST00000428696 TTC26A0AVF1 554 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 PDXKO00764 312 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 PSMA7O14818 248 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 MEFVO15553 781 aaPredicted RBP15.81■□□□□ 0.12
SGCE-204ENST00000428696 FAM189A1O60320 539 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 NR3C1P04150 777 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 ITGB1P05556 798 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 LINC00271P0C7V0 271 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 FOSL2P15408 326 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 SNRPFP62306 86 aaKnown RBP15.81■□□□□ 0.12
SGCE-204ENST00000428696 TFAMQ00059 246 aaKnown RBP15.81■□□□□ 0.12
SGCE-204ENST00000428696 CCDC85BQ15834 202 aaPredicted RBP15.81■□□□□ 0.12
SGCE-204ENST00000428696 CRELD2Q6UXH1 353 aaPredicted RBP15.81■□□□□ 0.12
SGCE-204ENST00000428696 POF1BQ8WVV4 589 aa15.81■□□□□ 0.12
SGCE-204ENST00000428696 PPP1R10Q96QC0 940 aaKnown RBP15.81■□□□□ 0.12
SGCE-204ENST00000428696 PAAF1Q9BRP4 392 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms