RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 HSD3B2P26439 372 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 CLRN1P58418 232 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 CXADRP78310 365 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 PPARAQ07869 468 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 EGFLAMQ63HQ2 1017 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 PASD1Q8IV76 773 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 FAM43AQ8N2R8 423 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 FUBP1Q96AE4 644 aaKnown RBP3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 CEP95Q96GE4 821 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 RNPC3Q96LT9 517 aaKnown RBP3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 FCRL4Q96PJ5 515 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 DNAJC7Q99615 494 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 RNPEPQ9H4A4 650 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 IFT57Q9NWB7 429 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 GPRC5DQ9NZD1 345 aa3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 MRPL42Q9Y6G3 142 aaKnown RBP3.48□□□□□ -1.85
HMGB3P2-201ENST00000411913 CNTNAP2Q9UHC6 1331 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 TRIM38O00635 465 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 PLD2O14939 933 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 PEX1O43933 1283 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 JMJD7P0C870 316 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 PTGER1P34995 402 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 RAP2BP61225 183 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 LRRC32Q14392 662 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZNF460Q14592 562 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 C19orf54Q5BKX5 351 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 MTX3Q5HYI7 312 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 MFSD14BQ5SR56 506 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZBTB41Q5SVQ8 909 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 PRAMEF14Q5SWL7 426 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 FOXR2Q6PJQ5 311 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 ABHD15Q6UXT9 468 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 THNSL2Q86YJ6 484 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 LILRB2Q8N423 598 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 JMYQ8N9B5 988 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 SLC35B2Q8TB61 432 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 HASPINQ8TF76 798 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 FUBP3Q96I24 572 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 ZNF496Q96IT1 587 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 PUS7Q96PZ0 661 aaKnown RBP3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 TMEM74BQ9NUR3 256 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 KCTD5Q9NXV2 234 aa3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 H2AFY2Q9P0M6 372 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P2-201ENST00000411913 WIPF3A6NGB9 483 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 PJA2O43164 708 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 CLSTN1O94985 981 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 GPANK1O95872 356 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 PRKCGP05129 697 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 SNRPA1P09661 255 aaKnown RBP3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 NCLP19338 710 aaKnown RBP3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 FGFR4P22455 802 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 PTPN7P35236 360 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 FLT3LGP49771 235 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 MEF2AQ02078 507 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 CFAP100Q494V2 611 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 KLHL22Q53GT1 634 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 FAM47AQ5JRC9 791 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 CDCA2Q69YH5 1023 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 SH3TC2Q8TF17 1288 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 SNX33Q8WV41 574 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 DPF1Q92782 380 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 MTO1Q9Y2Z2 717 aaKnown RBP3.46□□□□□ -1.86
HMGB3P2-201ENST00000411913 ZNF804BA4D1E1 1349 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 PRSS38A1L453 326 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 GAS7O60861 476 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 ATP2A2P16615 1042 aaKnown RBP3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 HSD11B2P80365 405 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 EIF2B5Q13144 721 aaKnown RBP3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 FHL1Q13642 323 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 C2orf27AQ580R0 203 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 TSTD2Q5T7W7 516 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 CREB3L3Q68CJ9 461 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 CRELD2Q6UXH1 353 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 COLGALT2Q8IYK4 626 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 SPATA3Q8NHX4 192 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 RSAD2Q8WXG1 361 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 SARAFQ96BY9 339 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 CLUHP3Q96NS8 147 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 TIMP4Q99727 224 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 KANSL2Q9H9L4 492 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 TMEM260Q9NX78 707 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 EVLQ9UI08 416 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 KCNE5Q9UJ90 142 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 ENTPD2Q9Y5L3 495 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 PTCH2Q9Y6C5 1203 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 NUMBLQ9Y6R0 609 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 AATKQ6ZMQ8 1374 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 SBNO2Q9Y2G9 1366 aa3.45□□□□□ -1.86
HMGB3P2-201ENST00000411913 ZNF521Q96K83 1311 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 MYO15BQ96JP2 1530 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 DCAF1Q9Y4B6 1507 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 CCDC151A5D8V7 595 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 ANKRD62A6NC57 917 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 CXorf49A8MYA2 514 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 CDC45O75419 566 aa3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 ERN1O75460 977 aaKnown RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 DNAJC8O75937 253 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 HMGB1P09429 215 aaKnown RBP3.44□□□□□ -1.86
HMGB3P2-201ENST00000411913 ITPKBP27987 946 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms