RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ACO2Q99798 780 aaKnown RBP6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 ELAC2Q9BQ52 826 aaKnown RBP6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 TCF25Q9BQ70 676 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 SCOCQ9UIL1 159 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 PMM2O15305 246 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 LTA4HP09960 611 aaKnown RBP6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 SERPINB3P29508 390 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 FXR1P51114 621 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 SCNN1GP51170 649 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 SLC5A3P53794 718 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 WNT3AP56704 352 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 MEF2AQ02078 507 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 UBE3CQ15386 1083 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 MUM1Q2TAK8 710 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 ABHD15Q6UXT9 468 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 Q6ZRM9 215 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 TOGARAM2Q6ZUX3 1019 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 OVCH2Q7RTZ1 564 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 GLB1L2Q8IW92 636 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 ZBTB34Q8NCN2 500 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 CACTINQ8WUQ7 758 aaKnown RBP6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 COA7Q96BR5 231 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 SLC2A13Q96QE2 648 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 ZNF703Q9H7S9 590 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 KLHL11Q9NVR0 708 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 CEP72Q9P209 647 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 PHTF1Q9UMS5 762 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 EDARQ9UNE0 448 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 FAM50BQ9Y247 325 aa6.2□□□□□ -1.42
HMGB1P13-201ENST00000406019 KLRG2A4D1S0 409 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 CAPN14A8MX76 684 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 GRXCR1A8MXD5 290 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 TUSC2O75896 110 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 SLC5A1P13866 664 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 PDCP20941 246 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 FAM214AQ32MH5 1076 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 USP39Q53GS9 565 aaKnown RBP6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 C19orf54Q5BKX5 351 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 FKBP15Q5T1M5 1219 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 MBNL2Q5VZF2 373 aaKnown RBP6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 KRT40Q6A162 431 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 USP45Q70EL2 814 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 AUTS2Q8WXX7 1259 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 MVB12AQ96EY5 273 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 MAP3K14Q99558 947 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 NAA15Q9BXJ9 866 aaKnown RBP6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 TMEM60Q9H2L4 133 aa6.19□□□□□ -1.42
HMGB1P13-201ENST00000406019 H3BML4 177 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 CTSSP25774 331 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 CASRP41180 1078 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 NRG3P56975 720 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 KIF23Q02241 960 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 FOXE3Q13461 319 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 ELAVL1Q15717 326 aaKnown RBP6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 CSRP2Q16527 193 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 ANO4Q32M45 955 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 NAIF1Q69YI7 327 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 IGFL4Q6B9Z1 124 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 LMBR1LQ6UX01 489 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 THEMISQ8N1K5 641 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 ANKRD35Q8N283 1001 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 MDGA1Q8NFP4 955 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 HOXB13Q92826 284 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 MIEF2Q96C03 454 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 C1GALT1C1Q96EU7 318 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 FAM204AQ9H8W3 233 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 DPP7Q9UHL4 492 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 INTUQ9ULD6 942 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 DAAM1Q9Y4D1 1078 aa6.18□□□□□ -1.42
HMGB1P13-201ENST00000406019 NRP1O14786 923 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 C1SP09871 688 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 TACR2P21452 398 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 XPAP23025 273 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 HIBADHP31937 336 aaKnown RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 ALDH5A1P51649 535 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 ZXDAP98168 799 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 MRPL49Q13405 166 aaKnown RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 RRP1BQ14684 758 aaKnown RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 FAM83BQ5T0W9 1011 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 SGMS1Q86VZ5 419 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 TMPRSS6Q8IU80 811 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 ELOA2Q8IYF1 753 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 GRAMD1CQ8IYS0 662 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 KIAA0319LQ8IZA0 1049 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 PPP1R35Q8TAP8 253 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 SNX33Q8WV41 574 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 LSM14BQ9BX40 385 aaKnown RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 CPEB1Q9BZB8 566 aaKnown RBP6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 IFT122Q9HBG6 1241 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 PTPRHQ9HD43 1115 aa6.17□□□□□ -1.42
HMGB1P13-201ENST00000406019 FAM227AF5H4B4 570 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 WNT10BO00744 389 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 MYBP10242 640 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 EDNRBP24530 442 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 WASP42768 502 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 NPEPPSP55786 919 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 DGCR2P98153 550 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms