RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 GARTP22102 1010 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 EDNRBP24530 442 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 GLG1Q92896 1179 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 HES6Q96HZ4 224 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 PBKQ96KB5 322 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 DDX47Q9H0S4 455 aaKnown RBP12.65□□□□□ -0.38
COL25A1-202ENST00000399127 COQ4Q9Y3A0 265 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 KRIT1O00522 736 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 CYP11B1P15538 503 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 MAP2K2P36507 400 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 ZNF211Q13398 564 aaPredicted RBP12.65□□□□□ -0.38
COL25A1-202ENST00000399127 BIRC3Q13489 604 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 SUGP1Q8IWZ8 645 aaKnown RBP12.65□□□□□ -0.38
COL25A1-202ENST00000399127 FBXO16Q8IX29 292 aaPredicted RBP12.65□□□□□ -0.38
COL25A1-202ENST00000399127 ZBTB10Q96DT7 871 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 FNBP1Q96RU3 617 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 CEP89Q96ST8 783 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 DAAM1Q9Y4D1 1078 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 A0A0G2JMZ2 1700 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 MCM3APO60318 1980 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 PMM2O15305 246 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 EXTL3O43909 919 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 ARL2P36404 184 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 GGCXP38435 758 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 TNNC1P63316 161 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 FMO1Q01740 532 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 CAPSQ13938 189 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 NEDD9Q14511 834 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 DCAF12L1Q5VU92 463 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 USP37Q86T82 979 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 ACTRT1Q8TDG2 376 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 PRPF31Q8WWY3 499 aaKnown RBP12.64□□□□□ -0.39
COL25A1-202ENST00000399127 PSPC1Q8WXF1 523 aaKnown RBP12.64□□□□□ -0.39
COL25A1-202ENST00000399127 COPS5Q92905 334 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 BTBD6Q96KE9 485 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 FGD4Q96M96 766 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
COL25A1-202ENST00000399127 MSTO1Q9BUK6 570 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 ISCUQ9H1K1 167 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 TMEM59LQ9UK28 342 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 ADAM21Q9UKJ8 722 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 ATP8B3O60423 1300 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 CCL15-CCL14A0A0B4J2E2 113 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 FGGP02679 453 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 FAM153BP0C7A2 387 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 SRGAP2CP0DJJ0 459 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 COPB2P35606 906 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 NAMPTP43490 491 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 PDE6CP51160 858 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 CCL15Q16663 113 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 FAM153CQ494X1 144 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 GLE1Q53GS7 698 aaKnown RBP12.64□□□□□ -0.39
COL25A1-202ENST00000399127 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 AADACL2Q6P093 401 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 METTL7BQ6UX53 244 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 CRELD2Q6UXH1 353 aaPredicted RBP12.64□□□□□ -0.39
COL25A1-202ENST00000399127 CPNE8Q86YQ8 564 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 IFT20Q8IY31 132 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 NIFKQ9BYG3 293 aaKnown RBP12.64□□□□□ -0.39
COL25A1-202ENST00000399127 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 AZI2Q9H6S1 392 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 NRBP2Q9NSY0 501 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 RBAKQ9NYW8 714 aaPredicted RBP12.64□□□□□ -0.39
COL25A1-202ENST00000399127 FAM153AQ9UHL3 310 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
COL25A1-202ENST00000399127 H0YCG3 227 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
COL25A1-202ENST00000399127 SOCS7O14512 581 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 RTN2O75298 545 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 SYF2O95926 243 aaKnown RBP12.63□□□□□ -0.39
COL25A1-202ENST00000399127 MARCKSL1P49006 195 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 GPC5P78333 572 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 KCTD2Q14681 263 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 MESDQ14696 234 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 TDRD10Q5VZ19 366 aaKnown RBP12.63□□□□□ -0.39
COL25A1-202ENST00000399127 TRAPPC12Q8WVT3 735 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 SEPT1Q8WYJ6 367 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 ALG3Q92685 438 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 VIPAS39Q9H9C1 493 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 ALG6Q9Y672 507 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 PDHXO00330 501 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 CES2O00748 559 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 DDX3YO15523 660 aaKnown RBP12.63□□□□□ -0.39
COL25A1-202ENST00000399127 SART1O43290 800 aaKnown RBP12.63□□□□□ -0.39
COL25A1-202ENST00000399127 CETPP11597 493 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
COL25A1-202ENST00000399127 EPHB4P54760 987 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 TARBP2Q15633 366 aaKnown RBP12.63□□□□□ -0.39
COL25A1-202ENST00000399127 C2CD6Q53TS8 623 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 FAM160B1Q5W0V3 765 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 PHLDB2Q86SQ0 1253 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 ZBTB33Q86T24 672 aa12.63□□□□□ -0.39
COL25A1-202ENST00000399127 TSEN2Q8NCE0 465 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms