RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ADPGKQ9BRR6 497 aa21.11■□□□□ 0.97
PDLIM2-205ENST00000397761 NAA15Q9BXJ9 866 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-205ENST00000397761 INTS2Q9H0H0 1204 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-205ENST00000397761 TOPORSQ9NS56 1045 aaPredicted RBP21.11■□□□□ 0.97
PDLIM2-205ENST00000397761 NOC2LQ9Y3T9 749 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-205ENST00000397761 B4GALT4O60513 344 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 ACTN1P12814 892 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 UCHL3P15374 230 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 GRM5P41594 1212 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 KCNJ6P48051 423 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 AP3M2P53677 418 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 MEA1Q16626 185 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 FAM228AQ86W67 206 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 WDR49Q8IV35 697 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 ZNF397Q8NF99 534 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 BAG1Q99933 345 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 MYO6Q9UM54 1294 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 PLAGL2Q9UPG8 496 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 TANC1Q9C0D5 1861 aa21.1■□□□□ 0.97
PDLIM2-205ENST00000397761 MEFVO15553 781 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 NRDCO43847 1150 aa21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 IL18RAPO95256 599 aa21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 C4BPAP04003 597 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 STAG3L1P0CL83 205 aa21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 THPOP40225 353 aa21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 MNX1P50219 401 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 APBA1Q02410 837 aa21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 SYN2Q92777 582 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 NUCKS1Q9H1E3 243 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 SQORQ9Y6N5 450 aa21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 KIAA0100Q14667 2235 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 BRCA2P51587 3418 aa21.09■□□□□ 0.97
PDLIM2-205ENST00000397761 RFX1P22670 979 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 POLR2FP61218 127 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 CDK17Q00537 523 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 PDXDC1Q6P996 788 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 WDR59Q6PJI9 974 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 TMEM192Q8IY95 271 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 FBXL13Q8NEE6 735 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 KIAA1524Q8TCG1 905 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 TRPV6Q9H1D0 765 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 RPF1Q9H9Y2 349 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 APEX2Q9UBZ4 518 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 PYCARDQ9ULZ3 195 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 NOD1Q9Y239 953 aa21.08■□□□□ 0.97
PDLIM2-205ENST00000397761 MROH7Q68CQ1 1323 aa21.08■□□□□ 0.96
PDLIM2-205ENST00000397761 CCDC85CA6NKD9 419 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 SGPL1O95470 568 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 CXCL8P10145 99 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 TNNI1P19237 187 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 JAM2P57087 298 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 SLC10A6Q3KNW5 377 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 FBXO47Q5MNV8 452 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 UBXN11Q5T124 520 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 TDRD10Q5VZ19 366 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 TRAF7Q6Q0C0 670 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 CACNA2D4Q7Z3S7 1137 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 TAS1R2Q8TE23 839 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 SEMA4DQ92854 862 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 ASB7Q9H672 318 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 CHST12Q9NRB3 414 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 PIN4Q9Y237 131 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 FHOD1Q9Y613 1164 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 ESPNB1AK53 854 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 ARHGAP6O43182 974 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 ZC3H11AO75152 810 aaKnown RBP eCLIP21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 RPS6KA5O75582 802 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 NPTXRO95502 500 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 MYCP01106 439 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 CTSHP09668 335 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 FAM126BQ8IXS8 530 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 OR5B17Q8NGF7 314 aa21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 U2AF1L4Q8WU68 220 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 EIF2AQ9BY44 585 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-205ENST00000397761 LRRC53A6NM62 1247 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 CD4P01730 458 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 OSTNP61366 133 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 ZNF618Q5T7W0 954 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 E4F1Q66K89 784 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 IQCEQ6IPM2 695 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 PHLDB3Q6NSJ2 640 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 RRAGAQ7L523 313 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 TMTC1Q8IUR5 882 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 CD302Q8IX05 232 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 EFCAB13Q8IY85 973 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 USP38Q8NB14 1042 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 ACAP3Q96P50 834 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 AGO3Q9H9G7 860 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 PLEKHA5Q9HAU0 1116 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 ERVK-5Q9HDB9 667 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 NLRC4Q9NPP4 1024 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 RAB20Q9NX57 234 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 AJAP1Q9UKB5 411 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 ST3GAL5Q9UNP4 418 aa21.06■□□□□ 0.96
PDLIM2-205ENST00000397761 GPR182O15218 404 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 LRRN2O75325 713 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 VNN1O95497 513 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 CKBP12277 381 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 LPIN1Q14693 890 aa21.05■□□□□ 0.96
PDLIM2-205ENST00000397761 DUOXA2Q1HG44 320 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms