RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TFDP1Q14186 410 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 CBWD6Q4V339 395 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 CBWD3Q5JTY5 395 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 CBWD5Q5RIA9 395 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 SLC39A4Q6P5W5 647 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 TXLNBQ8N3L3 684 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 LMO3Q8TAP4 145 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 OSMRQ99650 979 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 NAPGQ99747 312 aaPredicted RBP16.37■□□□□ 0.21
SCAF11-204ENST00000395454 NENFQ9UMX5 172 aa16.37■□□□□ 0.21
SCAF11-204ENST00000395454 A0A087WZ62 844 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 TADA3O75528 432 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 PIGRP01833 764 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 CLTBP09497 229 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 CKBP12277 381 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 NAMPTP43490 491 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 MRPS6P82932 125 aaKnown RBP16.36■□□□□ 0.21
SCAF11-204ENST00000395454 KIF5AQ12840 1032 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 RAPGEF1Q13905 1077 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 ASIC2Q16515 512 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 SLC18A3Q16572 532 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 TAS1R3Q7RTX0 852 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 RPAINQ86UA6 219 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 CAGE1Q8TC20 777 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 FDXACB1Q9BRP7 624 aaPredicted RBP16.36■□□□□ 0.21
SCAF11-204ENST00000395454 DEF6Q9H4E7 631 aa16.36■□□□□ 0.21
SCAF11-204ENST00000395454 GPR32O75388 356 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 KRT13P13646 458 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 GARTP22102 1010 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 VAMP7P51809 220 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 CDC42EP1Q00587 391 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 MYL7Q01449 175 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 BFSP2Q13515 415 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 TRIM71Q2Q1W2 868 aaKnown RBP16.35■□□□□ 0.21
SCAF11-204ENST00000395454 ZNF618Q5T7W0 954 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 FMNL3Q8IVF7 1028 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 HIPK3Q9H422 1215 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 IFT122Q9HBG6 1241 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 PRDM5Q9NQX1 630 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-204ENST00000395454 TMEM39AQ9NV64 488 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 CDC23Q9UJX2 597 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 GUCA1BQ9UMX6 200 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 CDY2AQ9Y6F7 541 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 STYXL1Q9Y6J8 313 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 ANO9A1A5B4 782 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 EFCAB8A8MWE9 144 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 ANKRD63C9JTQ0 380 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 CSDE1O75534 798 aaKnown RBP16.35■□□□□ 0.21
SCAF11-204ENST00000395454 TRIM49P0CI25 452 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 TRIM49CP0CI26 452 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 IQCEQ6IPM2 695 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 MTERF4Q7Z6M4 381 aaKnown RBP16.35■□□□□ 0.21
SCAF11-204ENST00000395454 ZNF410Q86VK4 478 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 LRRN4CLQ8ND94 238 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 PLEKHO2Q8TD55 490 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 STK33Q9BYT3 514 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 CELF4Q9BZC1 486 aaKnown RBP16.35■□□□□ 0.21
SCAF11-204ENST00000395454 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 CDHR5Q9HBB8 845 aa16.35■□□□□ 0.21
SCAF11-204ENST00000395454 AJAP1Q9UKB5 411 aaPredicted RBP16.35■□□□□ 0.21
SCAF11-204ENST00000395454 GFPT2O94808 682 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 CHRNA1P02708 482 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 ADRB2P07550 413 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 PHKA2P46019 1235 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 KLHL30Q0D2K2 578 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 SNRNP35Q16560 246 aaKnown RBP16.34■□□□□ 0.21
SCAF11-204ENST00000395454 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
SCAF11-204ENST00000395454 PAPD7Q5XG87 772 aaKnown RBP16.34■□□□□ 0.21
SCAF11-204ENST00000395454 ZBTB8OSQ8IWT0 167 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 TMC2Q8TDI7 906 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 MFSD14AQ96MC6 490 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 SPAG5Q96R06 1193 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 INTS2Q9H0H0 1204 aaKnown RBP16.34■□□□□ 0.21
SCAF11-204ENST00000395454 ADAMTS10Q9H324 1103 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 APEX2Q9UBZ4 518 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 TRPV2Q9Y5S1 764 aa16.34■□□□□ 0.21
SCAF11-204ENST00000395454 MYH10P35580 1976 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 F8VZ95 297 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 INO80B-WBP1J3KQ70 363 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 PITPNM1O00562 1244 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 KIAA0391O15091 583 aaKnown RBP16.33■□□□□ 0.21
SCAF11-204ENST00000395454 CAND2O75155 1236 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 PTENP60484 403 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 GFPT1Q06210 699 aaPredicted RBP16.33■□□□□ 0.21
SCAF11-204ENST00000395454 PPP3CAQ08209 521 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 C10orf76Q5T2E6 689 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 GCOM2Q9BZD3 368 aaPredicted RBP16.33■□□□□ 0.21
SCAF11-204ENST00000395454 INO80BQ9C086 356 aaPredicted RBP16.33■□□□□ 0.21
SCAF11-204ENST00000395454 GPR88Q9GZN0 384 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 C2orf40Q9H1Z8 148 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 LUC7LQ9NQ29 371 aaKnown RBP16.33■□□□□ 0.21
SCAF11-204ENST00000395454 TBX21Q9UL17 535 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 TFR2Q9UP52 801 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 COQ4Q9Y3A0 265 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 ALPK3Q96L96 1907 aa16.33■□□□□ 0.21
SCAF11-204ENST00000395454 UMODL1Q5DID0 1318 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms