RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 A1CFQ9NQ94 594 aaKnown RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 FAM114A2Q9NRY5 505 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 EURLQ9NYK6 297 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 TSC2P49815 1807 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 GOLGA8IPA6NC78 632 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 GOLGA8JA6NMD2 632 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CCND2P30279 289 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CFAP58Q5T655 872 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 LEKR1Q6ZMV7 388 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 SLC16A10Q8TF71 515 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 TRIM7Q9C029 511 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
TRIM39-202ENST00000376659 CYP26B1Q9NR63 512 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 RNF146Q9NTX7 359 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 PCDHA10Q9Y5I2 948 aa10.32□□□□□ -0.76
TRIM39-202ENST00000376659 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-202ENST00000376659 MEFVO15553 781 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-202ENST00000376659 TRAPPC3O43617 180 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 NR3C2P08235 984 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 DR1Q01658 176 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 ZACNQ401N2 412 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 NAA35Q5VZE5 725 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 ACAD10Q6JQN1 1059 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 YTHDF3Q7Z739 585 aaKnown RBP10.31□□□□□ -0.76
TRIM39-202ENST00000376659 KAT2BQ92831 832 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 NIFKQ9BYG3 293 aaKnown RBP10.31□□□□□ -0.76
TRIM39-202ENST00000376659 WNT8AQ9H1J5 351 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 YY1AP1Q9H869 796 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 RAB20Q9NX57 234 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 DENND3A2RUS2 1198 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 RARAP10276 462 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 TNFAIP3P21580 790 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF252P-AS1Q0IIN9 211 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 BIRC3Q13489 604 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 BRDTQ58F21 947 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-202ENST00000376659 ZBTB41Q5SVQ8 909 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 TTC19Q6DKK2 380 aaPredicted RBP10.31□□□□□ -0.76
TRIM39-202ENST00000376659 ASAP3Q8TDY4 903 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 HOMER2Q9NSB8 354 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 FZD1Q9UP38 647 aa10.31□□□□□ -0.76
TRIM39-202ENST00000376659 TTLL13PA6NNM8 815 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 SOCS7O14512 581 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 STAM2O75886 525 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 PRKCEQ02156 737 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 SPRED3Q2MJR0 410 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 PACS2Q86VP3 889 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 FBXL13Q8NEE6 735 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 MYCBPAPQ8TBZ2 947 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 ZKSCAN4Q969J2 545 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 UVRAGQ9P2Y5 699 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 O00370 1275 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 CNMDO75829 334 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 CHRNA3P32297 505 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 NLRP11P59045 1033 aaKnown RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 ACTR2P61160 394 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 CDCA2Q69YH5 1023 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 SLC13A5Q86YT5 568 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 MCOLN2Q8IZK6 566 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 SYCP3Q8IZU3 236 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 GPD1LQ8N335 351 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF564Q8TBZ8 553 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF317Q96PQ6 595 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 IWS1Q96ST2 819 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 NUP85Q9BW27 656 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 TSPYL1Q9H0U9 437 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 CCDC134Q9H6E4 229 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 GABBR1Q9UBS5 961 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 SUPT20HL2P0C7V6 817 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 KRT13P13646 458 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 MAGEA9P43362 315 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 MMP13P45452 471 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 CLUL1Q15846 466 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 QPCTQ16769 361 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 TBC1D10BQ4KMP7 808 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 FAM102BQ5T8I3 360 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF280CQ8ND82 737 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 FBXO25Q8TCJ0 367 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 PGM2Q96G03 612 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 PORCNQ9H237 461 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 R3HDMLQ9H3Y0 253 aa10.3□□□□□ -0.76
TRIM39-202ENST00000376659 CWC15Q9P013 229 aaKnown RBP10.3□□□□□ -0.76
TRIM39-202ENST00000376659 EXTL3O43909 919 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 GLRA2P23416 452 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 COILP38432 576 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 GTF2A1P52655 376 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 LLGL2Q6P1M3 1020 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 MAATS1Q7Z4T9 603 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 CPXCR1Q8N123 301 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 C3orf20Q8ND61 904 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF473Q8WTR7 871 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms