RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 MAPK8IP1Q9UQF2 711 aa17.35■□□□□ 0.37
PFDN4-201ENST00000371419 TNFSF9P41273 254 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 ACOT2P49753 483 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 GRIK3Q13003 919 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 SLC10A6Q3KNW5 377 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 EPC2Q52LR7 807 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 XKR4Q5GH76 650 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 ALKAL1Q6UXT8 129 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 ZNF280BQ86YH2 543 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 FUCA2Q9BTY2 467 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 PLVAPQ9BX97 442 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 KCTD10Q9H3F6 313 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 PCIF1Q9H4Z3 704 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 NRDE2Q9H7Z3 1164 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 PLEKHA5Q9HAU0 1116 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 PCDHB12Q9Y5F1 795 aa17.34■□□□□ 0.37
PFDN4-201ENST00000371419 CARNS1A5YM72 827 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 C5orf67F2Z3F1 127 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 PDXKO00764 312 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 PTGESO14684 152 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 EXTL3O43909 919 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 ZC3H11AO75152 810 aaKnown RBP eCLIP17.33■□□□□ 0.37
PFDN4-201ENST00000371419 DDHD2O94830 711 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 RB1P06400 928 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 THP07101 528 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 CXCL8P10145 99 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 POU5F1Q01860 360 aaKnown RBP17.33■□□□□ 0.37
PFDN4-201ENST00000371419 MORC3Q14149 939 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 ENOX2Q16206 610 aaKnown RBP17.33■□□□□ 0.37
PFDN4-201ENST00000371419 COBLL1Q53SF7 1204 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 ISM2Q6H9L7 571 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 KCNT2Q6UVM3 1135 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 C12orf56Q8IXR9 622 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 COLGALT1Q8NBJ5 622 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 FBXO22Q8NEZ5 403 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 SAAL1Q96ER3 474 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 ZNF558Q96NG5 402 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 FAM213AQ9BRX8 229 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 CXCL16Q9H2A7 254 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 HSPBP1Q9NZL4 362 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 CNTN3Q9P232 1028 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 PLAGL2Q9UPG8 496 aa17.33■□□□□ 0.37
PFDN4-201ENST00000371419 CITO14578 2027 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 SMIM28A0A1B0GU29 152 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 TTC26A0AVF1 554 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 BIN1O00499 593 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 CLIC2O15247 247 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 MEFVO15553 781 aaPredicted RBP17.32■□□□□ 0.36
PFDN4-201ENST00000371419 KCNE1P15382 129 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 PRCPP42785 496 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 ALDH7A1P49419 539 aaKnown RBP17.32■□□□□ 0.36
PFDN4-201ENST00000371419 BCAR1P56945 870 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 PPP2R3AQ06190 1150 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 DSC1Q08554 894 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 CRELD2Q6UXH1 353 aaPredicted RBP17.32■□□□□ 0.36
PFDN4-201ENST00000371419 GPD1LQ8N335 351 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 DEFB123Q8N688 67 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 TRIML1Q8N9V2 468 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 FAM161BQ96MY7 647 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 TMEM175Q9BSA9 504 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 DNAJB4Q9UDY4 337 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 RALGAPA2Q2PPJ7 1873 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 NLRC5Q86WI3 1866 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 CDH23Q9H251 3354 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 MYO9BQ13459 2157 aa17.32■□□□□ 0.36
PFDN4-201ENST00000371419 GOLGA8IPA6NC78 632 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 GOLGA8JA6NMD2 632 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 CALUO43852 315 aaPredicted RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 B4GALT3O60512 393 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 ADRB2P07550 413 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 PPM1AP35813 382 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 CYP2J2P51589 502 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 TUSC3Q13454 348 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 STIM1Q13586 685 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 HSP90AA2PQ14568 343 aaPredicted RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 GRIN2CQ14957 1233 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 GLRA4Q5JXX5 417 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 Q7L0L9 218 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 CD302Q8IX05 232 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 COLGALT2Q8IYK4 626 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 ZSWIM2Q8NEG5 633 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 P2RX5Q93086 422 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 PPP1R10Q96QC0 940 aaKnown RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 C11orf84Q9BUA3 381 aaPredicted RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 KIAA1586Q9HCI6 787 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 SLC38A7Q9NVC3 462 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 TRAF3IP3Q9Y228 551 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 KIAA1671Q9BY89 1806 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
PFDN4-201ENST00000371419 LACTBL1A8MY62 500 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 CAVIN2O95810 425 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 ALDH2P05091 517 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 GALTP07902 379 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 BMP6P22004 513 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 PBX3P40426 434 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 PPP1R2P41236 205 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 SLC11A1P49279 550 aa17.31■□□□□ 0.36
PFDN4-201ENST00000371419 NAB2Q15742 525 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms