RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ZNF577Q9BSK1 485 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 THAP2Q9H0W7 228 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 ACP6Q9NPH0 428 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 HOMER2Q9NSB8 354 aa10.02□□□□□ -0.81
SMG6-202ENST00000354901 RGS17Q9UGC6 210 aaPredicted RBP10.02□□□□□ -0.81
SMG6-202ENST00000354901 IGLV3-22A0A075B6J6 115 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 F8VZ95 297 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 HNRNPCP07910 306 aaKnown RBP eCLIP10.01□□□□□ -0.813e-7■■□□□ 12.3
SMG6-202ENST00000354901 TNFRSF8P28908 595 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 GSTT1P30711 240 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 SOX5P35711 763 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 MYBPC3Q14896 1274 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 MOXD1Q6UVY6 613 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 NT5DC3Q86UY8 548 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 SCFD2Q8WU76 684 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 SLC20A1Q8WUM9 679 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 ARHGEF2Q92974 986 aaKnown RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 OPTNQ96CV9 577 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 HSD17B14Q9BPX1 270 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 ISCUQ9H1K1 167 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 DBR1Q9UK59 544 aaKnown RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 ZMYM2Q9UBW7 1377 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 ARHGEF35A5YM69 484 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 C5orf60A6NFR6 353 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 CCDC160A6NGH7 325 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 K7ENM7 598 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 ENTPD5O75356 428 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 POLR2MP0CAP2 368 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 IMPDH2P12268 514 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 DESP17661 470 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 TARSP26639 723 aaKnown RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 BAG6P46379 1132 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 USP46P62068 366 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 DLG4P78352 724 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 MYL7Q01449 175 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 RIPK1Q13546 671 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 ERMARDQ5T6L9 678 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 TATDN1Q6P1N9 297 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 INTS8Q75QN2 995 aaKnown RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 CD302Q8IX05 232 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 ZSWIM2Q8NEG5 633 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 INTS2Q9H0H0 1204 aaKnown RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 AGPAT3Q9NRZ7 376 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 PCDHGA4Q9Y5G9 962 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 C10orf71Q711Q0 1435 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 GOLGA8IPA6NC78 632 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 GOLGA8JA6NMD2 632 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 FOXN3O00409 490 aaPredicted RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 ATMINO43313 823 aaPredicted RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 FAM200BP0CF97 657 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 HOXA7P31268 230 aaPredicted RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 PRKCIP41743 596 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 GCLMP48507 274 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 C10orf76Q5T2E6 689 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 CPXCR1Q8N123 301 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 LXNQ9BS40 222 aa10.01□□□□□ -0.81
SMG6-202ENST00000354901 POLR3CQ9BUI4 534 aaPredicted RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 UBE2TQ9NPD8 197 aaPredicted RBP10.01□□□□□ -0.81
SMG6-202ENST00000354901 SUN1O94901 812 aa10□□□□□ -0.81
SMG6-202ENST00000354901 ECHS1P30084 290 aa10□□□□□ -0.81
SMG6-202ENST00000354901 CACNA2D1P54289 1103 aa10□□□□□ -0.81
SMG6-202ENST00000354901 PLTPP55058 493 aa10□□□□□ -0.81
SMG6-202ENST00000354901 JAM2P57087 298 aa10□□□□□ -0.81
SMG6-202ENST00000354901 IGBP1P78318 339 aa10□□□□□ -0.81
SMG6-202ENST00000354901 MPP3Q13368 585 aa10□□□□□ -0.81
SMG6-202ENST00000354901 STRIP1Q5VSL9 837 aa10□□□□□ -0.81
SMG6-202ENST00000354901 POTEAQ6S8J7 498 aa10□□□□□ -0.81
SMG6-202ENST00000354901 APBB1IPQ7Z5R6 666 aaPredicted RBP10□□□□□ -0.81
SMG6-202ENST00000354901 TEX9Q8N6V9 391 aa10□□□□□ -0.81
SMG6-202ENST00000354901 KAT5Q92993 513 aa10□□□□□ -0.81
SMG6-202ENST00000354901 GMCL1Q96IK5 515 aa10□□□□□ -0.81
SMG6-202ENST00000354901 GLIS2Q9BZE0 524 aaPredicted RBP10□□□□□ -0.81
SMG6-202ENST00000354901 RAB17Q9H0T7 212 aa10□□□□□ -0.81
SMG6-202ENST00000354901 UNC45AQ9H3U1 944 aa10□□□□□ -0.81
SMG6-202ENST00000354901 CTTNBP2NLQ9P2B4 639 aa10□□□□□ -0.81
SMG6-202ENST00000354901 TMEM59LQ9UK28 342 aa10□□□□□ -0.81
SMG6-202ENST00000354901 RAD17O75943 681 aa10□□□□□ -0.81
SMG6-202ENST00000354901 GSTA1P08263 222 aa10□□□□□ -0.81
SMG6-202ENST00000354901 GAP43P17677 238 aa10□□□□□ -0.81
SMG6-202ENST00000354901 CIITAP33076 1130 aa10□□□□□ -0.81
SMG6-202ENST00000354901 PRELPP51888 382 aa10□□□□□ -0.81
SMG6-202ENST00000354901 PHLDB3Q6NSJ2 640 aa10□□□□□ -0.81
SMG6-202ENST00000354901 ZNF365Q70YC5 407 aa10□□□□□ -0.81
SMG6-202ENST00000354901 ZNF720Q7Z2F6 126 aa10□□□□□ -0.81
SMG6-202ENST00000354901 ACTRT1Q8TDG2 376 aa10□□□□□ -0.81
SMG6-202ENST00000354901 IDI2Q9BXS1 227 aa10□□□□□ -0.81
SMG6-202ENST00000354901 OLFML3Q9NRN5 406 aa10□□□□□ -0.81
SMG6-202ENST00000354901 SLC16A3O15427 465 aaKnown RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 PSMD10O75832 226 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 MARCKSL1P49006 195 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 DYNC1I2Q13409 638 aaKnown RBP9.99□□□□□ -0.81
SMG6-202ENST00000354901 CEP55Q53EZ4 464 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 TRIM7Q9C029 511 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 VPS33BQ9H267 617 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 ERVK-5Q9HDB9 667 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 FAM114A2Q9NRY5 505 aa9.99□□□□□ -0.81
SMG6-202ENST00000354901 DNAJC17Q9NVM6 304 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms