RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 WDR59Q6PJI9 974 aa20.35■□□□□ 0.85
EXOSC3-201ENST00000327304 PITPNM1O00562 1244 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 EXTL3O43909 919 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 NFX1Q12986 1120 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 NOTUMQ6P988 496 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 CRELD2Q6UXH1 353 aaPredicted RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 CEP120Q8N960 986 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 KIF18AQ8NI77 898 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 ERVK-5Q9HDB9 667 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 FAM207AQ9NSI2 230 aaPredicted RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 PADI3Q9ULW8 664 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 PLAGL2Q9UPG8 496 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 KIAA0391O15091 583 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 MCF2P10911 925 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 AXLP30530 894 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 ETF1P62495 437 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 PAK2Q13177 524 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 COL13A1Q5TAT6 717 aaPredicted RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 EIF2AQ9BY44 585 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 NUCKS1Q9H1E3 243 aaKnown RBP20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 HIPK3Q9H422 1215 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 TBX21Q9UL17 535 aa20.34■□□□□ 0.85
EXOSC3-201ENST00000327304 GPR182O15218 404 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 OGTO15294 1046 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 NPTXRO95502 500 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 TNFSF9P41273 254 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 SLC27A1Q6PCB7 646 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 THNSL1Q8IYQ7 743 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 SLC35C1Q96A29 364 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 CHP1Q99653 195 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 DESI2Q9BSY9 194 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 PPP1R12CQ9BZL4 782 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 CEP72Q9P209 647 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 SQORQ9Y6N5 450 aa20.33■□□□□ 0.85
EXOSC3-201ENST00000327304 MKI67P46013 3256 aaKnown RBP20.33■□□□□ 0.84
EXOSC3-201ENST00000327304 MAPK13O15264 365 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 CLTBP09497 229 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 UBXN11Q5T124 520 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 CCDC170Q8IYT3 715 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 PLEKHO2Q8TD55 490 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 ADPGKQ9BRR6 497 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 KIAA1586Q9HCI6 787 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 EPN1Q9Y6I3 576 aaPredicted RBP20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 GTPBP10A4D1E9 387 aaKnown RBP20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 EPHB6O15197 1021 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 NDUFA10O95299 355 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 LDHAP00338 332 aaKnown RBP20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 CYP2C18P33260 490 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 OSTNP61366 133 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 CYP24A1Q07973 514 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 GPNMBQ14956 572 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 DCAF4L1Q3SXM0 396 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 TRIM65Q6PJ69 517 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 TMEM192Q8IY95 271 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 USP38Q8NB14 1042 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 MYRIPQ8NFW9 859 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 BAP1Q92560 729 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 WNT8AQ9H1J5 351 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 PLCB1Q9NQ66 1216 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 TMEM39AQ9NV64 488 aa20.32■□□□□ 0.84
EXOSC3-201ENST00000327304 TANC1Q9C0D5 1861 aa20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 ZNF233A6NK53 670 aa20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 NBNO60934 754 aa20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 WNT7BP56706 349 aa20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 BFSP1Q12934 665 aa20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 DCAF17Q5H9S7 520 aaPredicted RBP20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 CACNA2D4Q7Z3S7 1137 aa20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 SYN2Q92777 582 aaPredicted RBP20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 MFSD14AQ96MC6 490 aa20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 LSM14BQ9BX40 385 aaKnown RBP20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 CPSF3Q9UKF6 684 aaKnown RBP20.31■□□□□ 0.84
EXOSC3-201ENST00000327304 MGEA5O60502 916 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 NOL4O94818 638 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 TRIM49P0CI25 452 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 TRIM49CP0CI26 452 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 KRT13P13646 458 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 CYLC1P35663 651 aaPredicted RBP20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 CCL23P55773 120 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 DLG4P78352 724 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 TWF2Q6IBS0 349 aaKnown RBP20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 INTS8Q75QN2 995 aaKnown RBP20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 ZNF592Q92610 1267 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 SCLYQ96I15 445 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 RBAKQ9NYW8 714 aaPredicted RBP20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 STAG3L1P0CL83 205 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 VAMP7P51809 220 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 C1orf220Q5T0J3 134 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 TCERG1LQ5VWI1 586 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 PDXDC1Q6P996 788 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 BRSK2Q8IWQ3 736 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 CCDC127Q96BQ5 260 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 IFIH1Q9BYX4 1025 aaKnown RBP20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 CHST12Q9NRB3 414 aa20.3■□□□□ 0.84
EXOSC3-201ENST00000327304 DSC3Q14574 896 aa20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 ENOX2Q16206 610 aaKnown RBP20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 EXOC3L4Q17RC7 722 aa20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 SYT10Q6XYQ8 523 aa20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 GBP6Q6ZN66 633 aa20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 RRAGAQ7L523 313 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms