RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PCYOX1Q9UHG3 505 aa20.27■□□□□ 0.84
SNX4-201ENST00000251775 PNMA3Q9UL41 463 aa20.27■□□□□ 0.84
SNX4-201ENST00000251775 TMEM150BA6NC51 233 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 SMNDC1O75940 238 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNX4-201ENST00000251775 RARGP13631 454 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 CXCL9Q07325 125 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 MYBPC2Q14324 1141 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 CLUL1Q15846 466 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 PALB2Q86YC2 1186 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 MGARPQ8TDB4 240 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 SYTL5Q8TDW5 730 aaPredicted RBP20.26■□□□□ 0.83
SNX4-201ENST00000251775 PARP2Q9UGN5 583 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 FOXN3O00409 490 aaPredicted RBP20.26■□□□□ 0.83
SNX4-201ENST00000251775 PODXLO00592 558 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 SUN1O94901 812 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 RXRBP28702 533 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 GBP1P32455 592 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 TNIP1Q15025 636 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 PCNX4Q63HM2 1172 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 NIM1KQ8IY84 436 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 GBP7Q8N8V2 638 aaPredicted RBP20.26■□□□□ 0.83
SNX4-201ENST00000251775 ZSWIM2Q8NEG5 633 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 DYDC1Q8WWB3 177 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 CBWD1Q9BRT8 395 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 HOMER3Q9NSC5 361 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 EMSYQ7Z589 1322 aa20.26■□□□□ 0.83
SNX4-201ENST00000251775 ANKRD63C9JTQ0 380 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 KIF3CO14782 793 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 CREB1P16220 341 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 CTNNA2P26232 953 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 GCKP35557 465 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 MARCKSL1P49006 195 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 GHRHRQ02643 423 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 PPP3CAQ08209 521 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 ASRGL1Q7L266 308 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 TAAR1Q96RJ0 339 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 ALG6Q9Y672 507 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 WDR46O15213 610 aaKnown RBP20.25■□□□□ 0.83
SNX4-201ENST00000251775 GJB6O95452 261 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 MSH2P43246 934 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 QARSP47897 775 aaKnown RBP20.25■□□□□ 0.83
SNX4-201ENST00000251775 MCF2L2Q86YR7 1114 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 FITM2Q8N6M3 262 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 ARMC2Q8NEN0 867 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 KRT35Q92764 455 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 TMEM206Q9H813 350 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 STK38LQ9Y2H1 464 aa20.25■□□□□ 0.83
SNX4-201ENST00000251775 MAPTP10636 758 aaKnown RBP20.24■□□□□ 0.83
SNX4-201ENST00000251775 PLS3P13797 630 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 EIF2AK2P19525 551 aaKnown RBP20.24■□□□□ 0.83
SNX4-201ENST00000251775 TNFAIP3P21580 790 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 MTMR1Q13613 665 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 RASA3Q14644 834 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 KIF22Q14807 665 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 UGCGQ16739 394 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 C11orf91Q3C1V1 193 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 NUGGCQ68CJ6 796 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 OTUD6AQ7L8S5 288 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 ARHGEF19Q8IW93 802 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 ZNF483Q8TF39 744 aaPredicted RBP20.24■□□□□ 0.83
SNX4-201ENST00000251775 ADAM22Q9P0K1 906 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 TRIM33Q9UPN9 1127 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 TMEM120BA0PK00 339 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 ANKRD62A6NC57 917 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 HSPA6P17066 643 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 VAMP7P51809 220 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 C1orf220Q5T0J3 134 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 MIS18BP1Q6P0N0 1132 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 CCDC137Q6PK04 289 aaKnown RBP20.24■□□□□ 0.83
SNX4-201ENST00000251775 VSTM1Q6UX27 236 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 TRMT1LQ7Z2T5 733 aaKnown RBP20.24■□□□□ 0.83
SNX4-201ENST00000251775 PLEKHO2Q8TD55 490 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 ART4Q93070 314 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 ACCSQ96QU6 501 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 SLC38A10Q9HBR0 1119 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 PFASO15067 1338 aa20.24■□□□□ 0.83
SNX4-201ENST00000251775 LONRF1Q17RB8 773 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 ZNF568Q3ZCX4 644 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 CAPRIN2Q6IMN6 1127 aaKnown RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 INTS8Q75QN2 995 aaKnown RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 ROPN1BQ9BZX4 212 aaPredicted RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 ROPN1Q9HAT0 212 aaPredicted RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 MYOZ2Q9NPC6 264 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 UBE2TQ9NPD8 197 aaPredicted RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 GPRC5CQ9NQ84 441 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 SEPT11Q9NVA2 429 aaKnown RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 PRKAG3Q9UGI9 489 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 ARL2BPQ9Y2Y0 163 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 ASTN2O75129 1339 aaPredicted RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 O00370 1275 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 ATP9AO75110 1047 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 LYPLA2O95372 231 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 YWHABP31946 246 aaKnown RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 GCLMP48507 274 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 RPS6P62753 249 aaKnown RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 ALCAMQ13740 583 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 ANKRD20A2Q5SQ80 823 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 ANKRD20A1Q5TYW2 823 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms