RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 TRIOBPQ9H2D6 2365 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 TGFB1I1O43294 461 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 OFD1O75665 1012 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 CA3P07451 260 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 CLTAP09496 248 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 ACOT2P49753 483 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 CYP2J2P51589 502 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 HTRA4P83105 476 aaPredicted RBP16.59■□□□□ 0.25
PAX6-268ENST00000640287 SMAD3P84022 425 aaKnown RBP16.59■□□□□ 0.25
PAX6-268ENST00000640287 RNASELQ05823 741 aaKnown RBP16.59■□□□□ 0.25
PAX6-268ENST00000640287 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 NOMO2Q5JPE7 1267 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 SPOUT1Q5T280 376 aaKnown RBP16.59■□□□□ 0.25
PAX6-268ENST00000640287 KLHL10Q6JEL2 608 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 TMEM192Q8IY95 271 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 CMTR2Q8IYT2 770 aaKnown RBP16.59■□□□□ 0.25
PAX6-268ENST00000640287 LRRC43Q8N309 656 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 FIBCD1Q8N539 461 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 FAM213AQ9BRX8 229 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 MRPL9Q9BYD2 267 aaKnown RBP16.59■□□□□ 0.25
PAX6-268ENST00000640287 KCTD10Q9H3F6 313 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 RNF19AQ9NV58 838 aa16.59■□□□□ 0.25
PAX6-268ENST00000640287 CGNQ9P2M7 1197 aaKnown RBP16.59■□□□□ 0.25
PAX6-268ENST00000640287 LCHNA4D1U4 455 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 GOLGA8JA6NMD2 632 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 PDXKO00764 312 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 PSMA7O14818 248 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 LDHAP00338 332 aaKnown RBP16.58■□□□□ 0.24
PAX6-268ENST00000640287 DNAJB2P25686 324 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 PPP1R2P41236 205 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 TNFSF9P41273 254 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 SKOR2Q2VWA4 1001 aaPredicted RBP16.58■□□□□ 0.24
PAX6-268ENST00000640287 ZBTB41Q5SVQ8 909 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 ADSSL1Q8N142 457 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 ZNF689Q96CS4 500 aaPredicted RBP16.58■□□□□ 0.24
PAX6-268ENST00000640287 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 ZFP42Q96MM3 310 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 CASD1Q96PB1 797 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 TSG101Q99816 390 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 NKX2-4Q9H2Z4 354 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 RPF1Q9H9Y2 349 aaKnown RBP16.58■□□□□ 0.24
PAX6-268ENST00000640287 HSPBP1Q9NZL4 362 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
PAX6-268ENST00000640287 YBX2Q9Y2T7 364 aaKnown RBP16.58■□□□□ 0.24
PAX6-268ENST00000640287 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
PAX6-268ENST00000640287 EXTL3O43909 919 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 POMCP01189 267 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 CXCL8P10145 99 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 BMP6P22004 513 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 SCNN1GP51170 649 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 PPP2R3AQ06190 1150 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 COBLL1Q53SF7 1204 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 RSPH1Q8WYR4 309 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 TIFAQ96CG3 184 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 SLC28A3Q9HAS3 691 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 RC3H2Q9HBD1 1191 aaKnown RBP16.57■□□□□ 0.24
PAX6-268ENST00000640287 KANSL3Q9P2N6 904 aa16.57■□□□□ 0.24
PAX6-268ENST00000640287 FAM189A1O60320 539 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 EXOC3O60645 756 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 NR3C1P04150 777 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 AFF1P51825 1210 aaKnown RBP16.56■□□□□ 0.24
PAX6-268ENST00000640287 GLRA4Q5JXX5 417 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 PPP2R2DQ66LE6 453 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 SASS6Q6UVJ0 657 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 XXYLT1Q8NBI6 393 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 DHTKD1Q96HY7 919 aaPredicted RBP16.56■□□□□ 0.24
PAX6-268ENST00000640287 SNX27Q96L92 541 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 FAM193BQ96PV7 902 aaPredicted RBP16.56■□□□□ 0.24
PAX6-268ENST00000640287 TBC1D13Q9NVG8 400 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 CPSF3Q9UKF6 684 aaKnown RBP16.56■□□□□ 0.24
PAX6-268ENST00000640287 CTNND2Q9UQB3 1225 aa16.56■□□□□ 0.24
PAX6-268ENST00000640287 MRPL42Q9Y6G3 142 aaKnown RBP16.56■□□□□ 0.24
PAX6-268ENST00000640287 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
PAX6-268ENST00000640287 NR2F2P24468 414 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
PAX6-268ENST00000640287 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
PAX6-268ENST00000640287 RDH13Q8NBN7 331 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 ZSWIM2Q8NEG5 633 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 SP7Q8TDD2 431 aaPredicted RBP16.55■□□□□ 0.24
PAX6-268ENST00000640287 NELFBQ8WX92 580 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 P2RX5Q93086 422 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 SEMA6BQ9H3T3 888 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 KIAA1586Q9HCI6 787 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 RBAKQ9NYW8 714 aaPredicted RBP16.55■□□□□ 0.24
PAX6-268ENST00000640287 MTUS1Q9ULD2 1270 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 TRAF3IP3Q9Y228 551 aa16.55■□□□□ 0.24
PAX6-268ENST00000640287 LINC01553A4QN01 128 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 ZNF233A6NK53 670 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 PPP1R3GB7ZBB8 358 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
PAX6-268ENST00000640287 THP07101 528 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 RPL13P26373 211 aaKnown RBP16.54■□□□□ 0.24
PAX6-268ENST00000640287 NLRP12P59046 1061 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 GRIK3Q13003 919 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 PAK1Q13153 545 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 SLC10A6Q3KNW5 377 aa16.54■□□□□ 0.24
PAX6-268ENST00000640287 HABP4Q5JVS0 413 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms