RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	LSS	P48449	732 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	MANF	P55145	182 aa	Known RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	FAM189B	P81408	668 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	OCRL	Q01968	901 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	MEF2A	Q02078	507 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	DUSP2	Q05923	314 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	MTA1	Q13330	715 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	CCDC181	Q5TID7	509 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	WDR78	Q5VTH9	848 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	TAF3	Q5VWG9	929 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	GET4	Q7L5D6	327 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	ANKRD23	Q86SG2	305 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	GLB1L2	Q8IW92	636 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	NIM1K	Q8IY84	436 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	RSAD2	Q8WXG1	361 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	DKK2	Q9UBU2	259 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	EVL	Q9UI08	416 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	PRSS50	Q9UI38	385 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	USP18	Q9UMW8	372 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	DCAF1	Q9Y4B6	1507 aa		4.6	□□□□□ -1.67
UBE2A-208	ENST00000628734	CENPVL1	A0A0U1RR11	272 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	GAGE12B	A1L429	117 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	LCHN	A4D1U4	455 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	GAGE12H	A6NDE8	117 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	TMEM200C	A6NKL6	621 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	EPB41L2	O43491	1005 aa	Known RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	XPA	P23025	273 aa	Predicted RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	APOBEC3A	P31941	199 aa	Predicted RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	ADCYAP1R1	P41586	468 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	NRG3	P56975	720 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	TAP1	Q03518	808 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	TIGD2	Q4W5G0	525 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	LMBR1L	Q6UX01	489 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	CLEC4G	Q6UXB4	293 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	BTNL9	Q6UXG8	535 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	DDX46	Q7L014	1031 aa	Known RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	GDF7	Q7Z4P5	450 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	NGEF	Q8N5V2	710 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	APPBP2	Q92624	585 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	DCLRE1C	Q96SD1	692 aa	Known RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	TARS2	Q9BW92	718 aa	Known RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	MS4A5	Q9H3V2	200 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	SYNPO2L	Q9H987	977 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	SPTLC3	Q9NUV7	552 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	EIF2B4	Q9UI10	523 aa	Known RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	CLCA2	Q9UQC9	943 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	PLAA	Q9Y263	795 aa		4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	NOP58	Q9Y2X3	529 aa	Known RBP	4.59	□□□□□ -1.67
UBE2A-208	ENST00000628734	WASHC2C	Q9Y4E1	1318 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	DIRC3	C9JPN6	131 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	CREB3	O43889	395 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	SH3BP5	O60239	455 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	TMEM127	O75204	238 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	LTA4H	P09960	611 aa	Known RBP	4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	PAX3	P23760	479 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	MAP2K1	Q02750	393 aa	Predicted RBP	4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	PPARA	Q07869	468 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	MGAT5	Q09328	741 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	C19orf54	Q5BKX5	351 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	UTP14C	Q5TAP6	766 aa	Known RBP	4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734		Q6YL49	198 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	FRMD7	Q6ZUT3	714 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	CREBRF	Q8IUR6	639 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	ARHGEF19	Q8IW93	802 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	AHI1	Q8N157	1196 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	OR14C36	Q8NHC7	312 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	ATL2	Q8NHH9	583 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	DRC1	Q96MC2	740 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	EPC1	Q9H2F5	836 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	YY1AP1	Q9H869	796 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	FANCL	Q9NW38	375 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	RAI14	Q9P0K7	980 aa		4.58	□□□□□ -1.68
UBE2A-208	ENST00000628734	RPGRIP1L	Q68CZ1	1315 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734		B5MCH6	92 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	LEFTY2	O00292	366 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	KIAA0355	O15063	1070 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	KDM1A	O60341	852 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	LPXN	O60711	386 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	ZSCAN20	P17040	1043 aa	Predicted RBP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	SSR1	P43307	286 aa	Known RBP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	SCNN1B	P51168	640 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	TRIM25	Q14258	630 aa	Known RBP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	UBE3C	Q15386	1083 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	C21orf62-AS1	Q17RA5	79 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	BEAN1	Q3B7T3	259 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	HECTD2	Q5U5R9	776 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	STRIP1	Q5VSL9	837 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	CNNM4	Q6P4Q7	775 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	XYLT1	Q86Y38	959 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	PLXDC1	Q8IUK5	500 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	SYT12	Q8IV01	421 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	BEND2	Q8NDZ0	799 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms