RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FEZ2Q9UHY8 353 aaPredicted RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PCDHA3Q9Y5H8 950 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 WDR90Q96KV7 1748 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 ATXN2Q99700 1313 aaKnown RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 LTBP3Q9NS15 1303 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 GOLGA6L10A6NI86 522 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 SPATA31C2B4DYI2 1134 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 H0YCG3 227 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 KIAA0391O15091 583 aaKnown RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 LSP1P33241 339 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 MARCKSL1P49006 195 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 GMPSP49915 693 aaPredicted RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 PDE6CP51160 858 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 CORO7P57737 925 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PDCLQ13371 301 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 ZNF211Q13398 564 aaPredicted RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 RUFY4Q6ZNE9 571 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 JAMLQ86YT9 394 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 ZDHHC14Q8IZN3 488 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 GPD1LQ8N335 351 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PRELID2Q8N945 189 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 BCAS4Q8TDM0 211 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 CCDC127Q96BQ5 260 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 POP1Q99575 1024 aaKnown RBP10.14□□□□□ -0.79
PDPN-212ENST00000621990 TRIM51Q9BSJ1 452 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 PAGR1Q9BTK6 254 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 CYP26B1Q9NR63 512 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 CYP39A1Q9NYL5 469 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 STYXL1Q9Y6J8 313 aa10.14□□□□□ -0.79
PDPN-212ENST00000621990 C19orf81C9J6K1 198 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 GBP1P32455 592 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 TMEM132BQ14DG7 1078 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 AGBL2Q5U5Z8 902 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 NAA35Q5VZE5 725 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ZDHHC24Q6UX98 284 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 C12orf50Q8NA57 414 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 ZNF564Q8TBZ8 553 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 POMGNT1Q8WZA1 660 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 FMO2Q99518 471 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 NUP85Q9BW27 656 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ATP6V0A4Q9HBG4 840 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ACP6Q9NPH0 428 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 TOPORSQ9NS56 1045 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 KCNG1Q9UIX4 513 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 MYH9P35579 1960 aaKnown RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 NUDT17P0C025 328 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 USP8P40818 1118 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 MDH1P40925 334 aaKnown RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 SOX10P56693 466 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ACTR2P61160 394 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 PRKCEQ02156 737 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 SLC20A2Q08357 652 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 TBC1D10BQ4KMP7 808 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 ACAD10Q6JQN1 1059 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 SWSAP1Q6NVH7 229 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 CCDC60Q8IWA6 550 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 GLG1Q92896 1179 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 EPN3Q9H201 632 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 EPB41L4BQ9H329 900 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 KIAA1586Q9HCI6 787 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 SLC9A2Q9UBY0 812 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 SLC12A6Q9UHW9 1150 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 A0A0G2JMZ2 1700 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 MYPNQ86TC9 1320 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 FZD9O00144 591 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 PODXLO00592 558 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 HNRNPDLO14979 420 aaKnown RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 PIGRP01833 764 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 PYGMP11217 842 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 UNGP13051 313 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 CCT5P48643 541 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ATP1A2P50993 1020 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 EIF3BP55884 814 aaKnown RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 DHX9Q08211 1270 aaKnown RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 SIX1Q15475 284 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 CLEC16AQ2KHT3 1053 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 AADACL2Q6P093 401 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 TTC27Q6P3X3 843 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 POTEAQ6S8J7 498 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 CATSPERGQ6ZRH7 1159 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ARFGAP2Q8N6H7 521 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 OR2W6PQ8NHA6 318 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ZKSCAN4Q969J2 545 aaPredicted RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 C18orf8Q96DM3 657 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 RUNDC3BQ96NL0 473 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 TEX13BQ9BXU2 312 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 FAM107BQ9H098 131 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 DPH5Q9H2P9 285 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ACAD9Q9H845 621 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 A1CFQ9NQ94 594 aaKnown RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 PICK1Q9NRD5 415 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 GRHL1Q9NZI5 618 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 CNOT7Q9UIV1 285 aaKnown RBP10.13□□□□□ -0.79
PDPN-212ENST00000621990 RASAL2Q9UJF2 1139 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 TELO2Q9Y4R8 837 aa10.13□□□□□ -0.79
PDPN-212ENST00000621990 ATMINO43313 823 aaPredicted RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 EXTL3O43909 919 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 ATG7O95352 703 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms