RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 POMCP01189 267 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 HOXD13P35453 343 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 ERVK-21P61565 698 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 KYAT1Q16773 422 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 SEZ6Q53EL9 994 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 TMEM192Q8IY95 271 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 ARNTL2Q8WYA1 636 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 POMGNT1Q8WZA1 660 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 CLP1Q92989 425 aaKnown RBP20.29■□□□□ 0.84
CIRBP-245ENST00000621399 SAMD11Q96NU1 681 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 ACAP3Q96P50 834 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 TOPORSQ9NS56 1045 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-245ENST00000621399 TBC1D13Q9NVG8 400 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 HCSTQ9UBK5 93 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 RWDD3Q9Y3V2 267 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 STYXL1Q9Y6J8 313 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 COL4A6Q14031 1691 aa20.29■□□□□ 0.84
CIRBP-245ENST00000621399 OGTO15294 1046 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 INPPL1O15357 1258 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 ADSSP30520 456 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 CTNNB1P35222 781 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 BMPR1AP36894 532 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 SCNN1GP51170 649 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 CAMK4Q16566 473 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 BMT2Q1RMZ1 405 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 Q7L0L9 218 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 DEFB123Q8N688 67 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 RPS6KC1Q96S38 1066 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 GBP3Q9H0R5 595 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 CWH43Q9H720 699 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 AAASQ9NRG9 546 aa20.28■□□□□ 0.84
CIRBP-245ENST00000621399 AGO2Q9UKV8 859 aaKnown RBP20.28■□□□□ 0.84
CIRBP-245ENST00000621399 GBF1Q92538 1859 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 ZMYM2Q9UBW7 1377 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 KIF20AO95235 890 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 CLTAP09496 248 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 LINC00271P0C7V0 271 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 KNOP1Q1ED39 458 aaKnown RBP20.27■□□□□ 0.84
CIRBP-245ENST00000621399 EPC2Q52LR7 807 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 SPATA20Q8TB22 786 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 FAM193BQ96PV7 902 aaPredicted RBP20.27■□□□□ 0.84
CIRBP-245ENST00000621399 MIOSQ9NXC5 875 aa20.27■□□□□ 0.84
CIRBP-245ENST00000621399 LAG3P18627 525 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 GARTP22102 1010 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 TNFSF9P41273 254 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 ZBTB41Q5SVQ8 909 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 ARMCX5Q6P1M9 558 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 HS2ST1Q7LGA3 356 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 ZNF280BQ86YH2 543 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 GSTCDQ8NEC7 633 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 FBXO22Q8NEZ5 403 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 MAPK8IP1Q9UQF2 711 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 PCDHB12Q9Y5F1 795 aa20.26■□□□□ 0.83
CIRBP-245ENST00000621399 TGFB1I1O43294 461 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 FAM189A1O60320 539 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 ZC3H11AO75152 810 aaKnown RBP eCLIP20.25■□□□□ 0.833e-7■■□□□ 12.2
CIRBP-245ENST00000621399 DDHD2O94830 711 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 RB1P06400 928 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 ACOT2P49753 483 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 SNRPFP62306 86 aaKnown RBP20.25■□□□□ 0.83
CIRBP-245ENST00000621399 ZNF658Q5TYW1 1059 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-245ENST00000621399 COLGALT1Q8NBJ5 622 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 SNX27Q96L92 541 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 CBWD1Q9BRT8 395 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 CXCL16Q9H2A7 254 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 CLSTN2Q9H4D0 955 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 PRDM12Q9H4Q4 367 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 PCIF1Q9H4Z3 704 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 NRDE2Q9H7Z3 1164 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 RPF1Q9H9Y2 349 aaKnown RBP20.25■□□□□ 0.83
CIRBP-245ENST00000621399 AGPAT3Q9NRZ7 376 aa20.25■□□□□ 0.83
CIRBP-245ENST00000621399 PTGESO14684 152 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 THP07101 528 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 CXCL8P10145 99 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 MCM4P33991 863 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 ALDH7A1P49419 539 aaKnown RBP20.24■□□□□ 0.83
CIRBP-245ENST00000621399 BCAR1P56945 870 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 GRIK3Q13003 919 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 SLC10A6Q3KNW5 377 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 ISM2Q6H9L7 571 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 KCNT2Q6UVM3 1135 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 ALKAL1Q6UXT8 129 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 SMYD4Q8IYR2 804 aaPredicted RBP20.24■□□□□ 0.83
CIRBP-245ENST00000621399 GOLGA5Q8TBA6 731 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 GPT2Q8TD30 523 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 NOC3LQ8WTT2 800 aaKnown RBP20.24■□□□□ 0.83
CIRBP-245ENST00000621399 SAAL1Q96ER3 474 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 ZNF558Q96NG5 402 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 FAM213AQ9BRX8 229 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 PLVAPQ9BX97 442 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 GTPBP4Q9BZE4 634 aaKnown RBP20.24■□□□□ 0.83
CIRBP-245ENST00000621399 DNAJB4Q9UDY4 337 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 CPSF3Q9UKF6 684 aaKnown RBP20.24■□□□□ 0.83
CIRBP-245ENST00000621399 MAN1B1Q9UKM7 699 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 PLAGL2Q9UPG8 496 aa20.24■□□□□ 0.83
CIRBP-245ENST00000621399 SMIM28A0A1B0GU29 152 aa20.23■□□□□ 0.83
CIRBP-245ENST00000621399 EPOPA6NHQ4 379 aa20.23■□□□□ 0.83
CIRBP-245ENST00000621399 C5orf67F2Z3F1 127 aa20.23■□□□□ 0.83
CIRBP-245ENST00000621399 RFXAPO00287 272 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms