RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 METTL13Q8N6R0 699 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 AFAP1L1Q8TED9 768 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 PSPC1Q8WXF1 523 aaKnown RBP22.95■■□□□ 1.26
LIME1-210ENST00000621325 NT5C1BQ96P26 610 aa22.95■■□□□ 1.26
LIME1-210ENST00000621325 AGO2Q9UKV8 859 aaKnown RBP22.95■■□□□ 1.26
LIME1-210ENST00000621325 FTLP02792 175 aaPredicted RBP22.94■■□□□ 1.26
LIME1-210ENST00000621325 GTF2A1P52655 376 aaPredicted RBP22.94■■□□□ 1.26
LIME1-210ENST00000621325 CRELD2Q6UXH1 353 aaPredicted RBP22.94■■□□□ 1.26
LIME1-210ENST00000621325 COPS5Q92905 334 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 VTI1AQ96AJ9 217 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 GPR20Q99678 358 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 ANKFY1Q9P2R3 1169 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 CHORDC1Q9UHD1 332 aaPredicted RBP22.94■■□□□ 1.26
LIME1-210ENST00000621325 STYXL1Q9Y6J8 313 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 ANKRD62A6NC57 917 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 TTLL13PA6NNM8 815 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 OSBPP22059 807 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 GTF2H1P32780 548 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 RFC5P40937 340 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 GYS2P54840 703 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 FASTKD5Q7L8L6 764 aaKnown RBP22.94■■□□□ 1.26
LIME1-210ENST00000621325 LMBR1Q8WVP7 490 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 GLG1Q92896 1179 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 PTPRJQ12913 1337 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 MCM3APO60318 1980 aa22.94■■□□□ 1.26
LIME1-210ENST00000621325 CEP104O60308 925 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 CALCAP01258 141 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 C8orf74Q6P047 294 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 ARMC9Q7Z3E5 817 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 USP37Q86T82 979 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 USP38Q8NB14 1042 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 MMEP08473 750 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 SEZ6Q53EL9 994 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 CELF3Q5SZQ8 465 aaKnown RBP22.93■■□□□ 1.26
LIME1-210ENST00000621325 C15orf39Q6ZRI6 1047 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 PRPF31Q8WWY3 499 aaKnown RBP22.93■■□□□ 1.26
LIME1-210ENST00000621325 AZI2Q9H6S1 392 aa22.93■■□□□ 1.26
LIME1-210ENST00000621325 MAFO75444 373 aaPredicted RBP22.92■■□□□ 1.26
LIME1-210ENST00000621325 ISCUQ9H1K1 167 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 TAF1DQ9H5J8 278 aaPredicted RBP22.92■■□□□ 1.26
LIME1-210ENST00000621325 PDGFCQ9NRA1 345 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 STIM2Q9P246 746 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 SUCLA2Q9P2R7 463 aaPredicted RBP22.92■■□□□ 1.26
LIME1-210ENST00000621325 ERVK-9P63128 1117 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 MKRN4PQ13434 485 aaPredicted RBP22.92■■□□□ 1.26
LIME1-210ENST00000621325 PSMD6Q15008 389 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 LDLRAD1Q5T700 205 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 SYCE1Q8N0S2 351 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 KRT12Q99456 494 aa22.92■■□□□ 1.26
LIME1-210ENST00000621325 ZSCAN5CA6NGD5 496 aaPredicted RBP22.91■■□□□ 1.26
LIME1-210ENST00000621325 PIGRP01833 764 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 POTEJP0CG39 1038 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 CYP11B1P15538 503 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 TNNI1P19237 187 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 FMO1Q01740 532 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.91■■□□□ 1.26
LIME1-210ENST00000621325 LRRC71Q8N4P6 559 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 HES6Q96HZ4 224 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 PBKQ96KB5 322 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 RASSF4Q9H2L5 321 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 ZNF408Q9H9D4 720 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 BCCIPQ9P287 314 aaKnown RBP eCLIP22.91■■□□□ 1.26
LIME1-210ENST00000621325 ZBTB42B2RXF5 422 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 NOP56O00567 594 aaKnown RBP22.91■■□□□ 1.26
LIME1-210ENST00000621325 GLI1P08151 1106 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 HARSP12081 509 aaKnown RBP22.91■■□□□ 1.26
LIME1-210ENST00000621325 ABCD1P33897 745 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 CLDN10P78369 228 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 MAP9Q49MG5 647 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 KCNN1Q92952 543 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 FNBP1Q96RU3 617 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 MSTO1Q9BUK6 570 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 SELENOOQ9BVL4 669 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 KIAA1586Q9HCI6 787 aa22.91■■□□□ 1.26
LIME1-210ENST00000621325 CES2O00748 559 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 ATMINO43313 823 aaPredicted RBP22.9■■□□□ 1.26
LIME1-210ENST00000621325 ADCY3O60266 1144 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 TDRD10Q5VZ19 366 aaKnown RBP22.9■■□□□ 1.26
LIME1-210ENST00000621325 CCDC62Q6P9F0 684 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 ZBTB10Q96DT7 871 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 SPATA33Q96N06 139 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 TMEM59LQ9UK28 342 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 A0A0B4J269 797 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 SNAPC2Q13487 334 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 KLHL7Q8IXQ5 586 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 AENQ8WTP8 325 aaKnown RBP22.9■■□□□ 1.26
LIME1-210ENST00000621325 TRAPPC12Q8WVT3 735 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 MPHOSPH6Q99547 160 aaKnown RBP22.9■■□□□ 1.26
LIME1-210ENST00000621325 AP1M1Q9BXS5 423 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 RBAKQ9NYW8 714 aaPredicted RBP22.9■■□□□ 1.26
LIME1-210ENST00000621325 AMFRQ9UKV5 643 aa22.9■■□□□ 1.26
LIME1-210ENST00000621325 GLTPD2A6NH11 291 aa22.89■■□□□ 1.26
LIME1-210ENST00000621325 C4BPAP04003 597 aaKnown RBP22.89■■□□□ 1.26
LIME1-210ENST00000621325 KCTD19Q17RG1 926 aaPredicted RBP22.89■■□□□ 1.26
LIME1-210ENST00000621325 ZACNQ401N2 412 aa22.89■■□□□ 1.26
LIME1-210ENST00000621325 SCARA3Q6AZY7 606 aa22.89■■□□□ 1.26
LIME1-210ENST00000621325 SPOPLQ6IQ16 392 aa22.89■■□□□ 1.26
LIME1-210ENST00000621325 ACTRT1Q8TDG2 376 aa22.89■■□□□ 1.26
LIME1-210ENST00000621325 SLC10A4Q96EP9 437 aa22.89■■□□□ 1.26
LIME1-210ENST00000621325 MROH8Q9H579 483 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms