RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 KRT18P05783 430 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 SRGAP2BP0DMP2 458 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 MYBP10242 640 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 LAG3P18627 525 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 IBSPP21815 317 aaPredicted RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 SYKP43405 635 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 AFF1P51825 1210 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 TPM4P67936 248 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 FAM193AP78312 1265 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 GTF2BQ00403 316 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 DPYDQ12882 1025 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 COASYQ13057 564 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 BTG3Q14201 252 aaPredicted RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 KYAT1Q16773 422 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 EPC2Q52LR7 807 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 TJAP1Q5JTD0 557 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 CLLU1OSQ5K130 101 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 NOTUMQ6P988 496 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 Q7L0L9 218 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 MRPL10Q7Z7H8 261 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ECHDC2Q86YB7 292 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 LRRC43Q8N309 656 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 TMEM130Q8N3G9 435 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 MYCT1Q8N699 235 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 SMG8Q8ND04 991 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ZSWIM2Q8NEG5 633 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 KIAA1524Q8TCG1 905 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ERCC4Q92889 916 aaPredicted RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 LPPQ93052 612 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 HLA-CQ95604 372 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 MRFAP1L1Q96HT8 127 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 IFT74Q96LB3 600 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 DRC1Q96MC2 740 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 TSPAN18Q96SJ8 248 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ACO2Q99798 780 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 TARS2Q9BW92 718 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 CUEDC2Q9H467 287 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 CLSTN2Q9H4D0 955 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 PDZD7Q9H5P4 517 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 PARVGQ9HBI0 331 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 PTPRHQ9HD43 1115 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 NGRNQ9NPE2 291 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 KMT5AQ9NQR1 393 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 PANK4Q9NVE7 773 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 PRMT7Q9NVM4 692 aaPredicted RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ANO10Q9NW15 660 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 THEGQ9P2T0 379 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 IMPACTQ9P2X3 320 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ODF2LQ9ULJ1 636 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 PIN4Q9Y237 131 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 SSX2IPQ9Y2D8 614 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 R3HCC1Q9Y3T6 440 aaKnown RBP5.75□□□□□ -1.49
SHMT1-211ENST00000618902 WDR87Q6ZQQ6 2873 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 RALGAPA2Q2PPJ7 1873 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 UQCRHLA0A096LP55 91 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 A0A1B0GUA9 196 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 EPOPA6NHQ4 379 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 GOLGA6L19H0YKK7 550 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 FAM189A1O60320 539 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 TBCAO75347 108 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ERLIN2O94905 339 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PRPF6O94906 941 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 NPTXRO95502 500 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 UQCRHP07919 91 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 FGFR1P11362 822 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 IDEP14735 1019 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 GAP43P17677 238 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PROZP22891 400 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PAX3P23760 479 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 IGFBP6P24592 240 aaPredicted RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ALDH7A1P49419 539 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 SMTNP53814 917 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 GSDMDP57764 484 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ASIC1P78348 528 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 POU5F1Q01860 360 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 FAM160A1Q05DH4 1040 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 STK4Q13043 487 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 DMP1Q13316 513 aaPredicted RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 PNOCQ13519 176 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 HERC4Q5GLZ8 1057 aaPredicted RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 CT47A1Q5JQC4 288 aaPredicted RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ZBTB41Q5SVQ8 909 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 TWF2Q6IBS0 349 aaKnown RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ELMSAN1Q6PJG2 1045 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 GLB1LQ6UWU2 654 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 AGMOQ6ZNB7 445 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 LRRC55Q6ZSA7 311 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 UNC13DQ70J99 1090 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 RTL10Q7L3V2 364 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 EPM2AIP1Q7L775 607 aaPredicted RBP5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ZNF720Q7Z2F6 126 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 HAUS6Q7Z4H7 955 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 MAP4K3Q8IVH8 894 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 ZBTB8OSQ8IWT0 167 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 HS6ST3Q8IZP7 471 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 CEP120Q8N960 986 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 KIAA0895Q8NCT3 520 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 RNF214Q8ND24 703 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 DEPTORQ8TB45 409 aa5.74□□□□□ -1.49
SHMT1-211ENST00000618902 MYLIPQ8WY64 445 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms