RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 GBP4Q96PP9 640 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 CDX2Q99626 313 aaPredicted RBP18.17■□□□□ 0.5
IRF1-211ENST00000613424 CCDC94Q9BW85 323 aaPredicted RBP18.17■□□□□ 0.5
IRF1-211ENST00000613424 STYXL1Q9Y6J8 313 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 MYO9BQ13459 2157 aa18.17■□□□□ 0.5
IRF1-211ENST00000613424 A0A0B4J269 797 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 C5orf67F2Z3F1 127 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 EIF3DO15371 548 aaKnown RBP eCLIP18.16■□□□□ 0.5
IRF1-211ENST00000613424 KINO60870 393 aaKnown RBP18.16■□□□□ 0.5
IRF1-211ENST00000613424 RB1P06400 928 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 HOXD13P35453 343 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 SCNN1GP51170 649 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 RNASELQ05823 741 aaKnown RBP18.16■□□□□ 0.5
IRF1-211ENST00000613424 STK4Q13043 487 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 PNOCQ13519 176 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 SEZ6Q53EL9 994 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 SLFN12LQ6IEE8 588 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 ZNF280BQ86YH2 543 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 COLGALT1Q8NBJ5 622 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 ACAP3Q96P50 834 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 CXCL16Q9H2A7 254 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 NRDE2Q9H7Z3 1164 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 TMEM206Q9H813 350 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 AAASQ9NRG9 546 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
IRF1-211ENST00000613424 H3BNC9 293 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 DDHD2O94830 711 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 LAG3P18627 525 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 ADSSP30520 456 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 KCNT2Q6UVM3 1135 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 ELOA2Q8IYF1 753 aaPredicted RBP18.15■□□□□ 0.5
IRF1-211ENST00000613424 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 MYLIPQ8WY64 445 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 CCDC47Q96A33 483 aaKnown RBP18.15■□□□□ 0.5
IRF1-211ENST00000613424 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 GBP3Q9H0R5 595 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 LMBRD1Q9NUN5 540 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 PCDHB12Q9Y5F1 795 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 ZMYM2Q9UBW7 1377 aa18.15■□□□□ 0.5
IRF1-211ENST00000613424 KIAA1671Q9BY89 1806 aa18.14■□□□□ 0.5
IRF1-211ENST00000613424 RALGAPA2Q2PPJ7 1873 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 OGTO15294 1046 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 FAM189A1O60320 539 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 B4GALT3O60512 393 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 RHOBTB3O94955 611 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 PBX3P40426 434 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 YARSP54577 528 aaKnown RBP18.14■□□□□ 0.49
IRF1-211ENST00000613424 BCAR1P56945 870 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 GPM6BQ13491 265 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 KCNB1Q14721 858 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 ALKAL1Q6UXT8 129 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 NELFCDQ8IXH7 590 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 KLHL23Q8NBE8 558 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 KIAA0895Q8NCT3 520 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 GDPD5Q8WTR4 605 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 POMGNT1Q8WZA1 660 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 FAM193BQ96PV7 902 aaPredicted RBP18.14■□□□□ 0.49
IRF1-211ENST00000613424 RPS6KC1Q96S38 1066 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 MSTO1Q9BUK6 570 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 DNAJB4Q9UDY4 337 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 HOOK1Q9UJC3 728 aaKnown RBP18.14■□□□□ 0.49
IRF1-211ENST00000613424 PLAGL2Q9UPG8 496 aa18.14■□□□□ 0.49
IRF1-211ENST00000613424 PTGESO14684 152 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 LPXNO60711 386 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 ZC3H11AO75152 810 aaKnown RBP eCLIP18.13■□□□□ 0.49
IRF1-211ENST00000613424 GALTP07902 379 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 CLTAP09496 248 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 TNFSF9P41273 254 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 ALDH7A1P49419 539 aaKnown RBP18.13■□□□□ 0.49
IRF1-211ENST00000613424 ADGRE1Q14246 886 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 BMT2Q1RMZ1 405 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 XKR4Q5GH76 650 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 ZBTB41Q5SVQ8 909 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 ERCC4Q92889 916 aaPredicted RBP18.13■□□□□ 0.49
IRF1-211ENST00000613424 P2RX5Q93086 422 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 ZNF558Q96NG5 402 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 GAS2L1Q99501 681 aaPredicted RBP18.13■□□□□ 0.49
IRF1-211ENST00000613424 C11orf84Q9BUA3 381 aaPredicted RBP18.13■□□□□ 0.49
IRF1-211ENST00000613424 TOPORSQ9NS56 1045 aaPredicted RBP18.13■□□□□ 0.49
IRF1-211ENST00000613424 AGO2Q9UKV8 859 aaKnown RBP18.13■□□□□ 0.49
IRF1-211ENST00000613424 PCDHA5Q9Y5H7 936 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 UBE4BO95155 1302 aa18.13■□□□□ 0.49
IRF1-211ENST00000613424 NT5C1B-RDH14C9J2C7 533 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 MEFVO15553 781 aaPredicted RBP18.12■□□□□ 0.49
IRF1-211ENST00000613424 TGFB1I1O43294 461 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 SMC2O95347 1197 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 ALDH2P05091 517 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 ITGB1P05556 798 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 THP07101 528 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 GARTP22102 1010 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 GRIK3Q13003 919 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 KYAT1Q16773 422 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 SLC10A6Q3KNW5 377 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 COLGALT2Q8IYK4 626 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 SPATA20Q8TB22 786 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 SNX27Q96L92 541 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 TMEM175Q9BSA9 504 aa18.12■□□□□ 0.49
IRF1-211ENST00000613424 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
IRF1-211ENST00000613424 CPSF3Q9UKF6 684 aaKnown RBP18.12■□□□□ 0.49
IRF1-211ENST00000613424 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms