RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 SAAL1Q96ER3 474 aa17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 FAM213AQ9BRX8 229 aa17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 FTHL17Q9BXU8 183 aa17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 IFIH1Q9BYX4 1025 aaKnown RBP17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 GRPEL1Q9HAV7 217 aa17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 ARMCX3Q9UH62 379 aaPredicted RBP17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 CPSF3Q9UKF6 684 aaKnown RBP17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 GOLGA8IPA6NC78 632 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 GOLGA8JA6NMD2 632 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 ADRB2P07550 413 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 CLTAP09496 248 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 BMP8BP34820 402 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 GRM5P41594 1212 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 MAGEA10P43363 369 aaPredicted RBP17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 ACOT2P49753 483 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 MRE11P49959 708 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 CCL23P55773 120 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 FANCCQ00597 558 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 KRT31Q15323 416 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 CCDC40Q4G0X9 1142 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 INTS8Q75QN2 995 aaKnown RBP17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 CBWD2Q8IUF1 395 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 RDH13Q8NBN7 331 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 ANKRD20A12PQ8NF67 263 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 TMC2Q8TDI7 906 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 APBB2Q92870 758 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 EIF2AQ9BY44 585 aaKnown RBP17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 PPP1R12CQ9BZL4 782 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 MTMR10Q9NXD2 777 aa17.38■□□□□ 0.37
CLTCL1-207ENST00000611723 MGEA5O60502 916 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 ZNF623O75123 536 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 NPTXRO95502 500 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 STAG3L1P0CL83 205 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 MTIF2P46199 727 aaKnown RBP17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 PPP2R3AQ06190 1150 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 CYP24A1Q07973 514 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 HSP90AA4PQ58FG1 418 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 ZBTB41Q5SVQ8 909 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 TWF2Q6IBS0 349 aaKnown RBP17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 MRPL10Q7Z7H8 261 aaKnown RBP17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 BRSK2Q8IWQ3 736 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 THNSL1Q8IYQ7 743 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 SEPT8Q92599 483 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 SCLYQ96I15 445 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 TUBGCP2Q9BSJ2 902 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 RGS18Q9NS28 235 aa17.37■□□□□ 0.37
CLTCL1-207ENST00000611723 A0A0U1RQF3 1178 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 HARSP12081 509 aaKnown RBP17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 SKIP12755 728 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 KRT13P13646 458 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 ITGB8P26012 769 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 COPB1P53618 953 aaKnown RBP17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 FAM189BP81408 668 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 BFSP1Q12934 665 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 PSMD6Q15008 389 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 SURF1Q15526 300 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 MAN2A1Q16706 1144 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 RTN4RL1Q86UN2 441 aaPredicted RBP17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 CEP120Q8N960 986 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 DBF4BQ8NFT6 615 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 VWCEQ96DN2 955 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 TSPYL2Q9H2G4 693 aaPredicted RBP17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 FAM105AQ9NUU6 356 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 STXBP5LQ9Y2K9 1186 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 TET1Q8NFU7 2136 aa17.36■□□□□ 0.37
CLTCL1-207ENST00000611723 AP5Z1O43299 807 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 RAG1P15918 1043 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 TNFSF9P41273 254 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 RAB27AP51159 221 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 VAMP7P51809 220 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 CLDN10P78369 228 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 NR1I3Q14994 352 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 ENOX2Q16206 610 aaKnown RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 USP37Q86T82 979 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 CREBRFQ8IUR6 639 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 SMG8Q8ND04 991 aaKnown RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 PLEKHO2Q8TD55 490 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 PARD3BQ8TEW8 1205 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 ACAP3Q96P50 834 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 ADAM2Q99965 735 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 CCDC94Q9BW85 323 aaPredicted RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 COL25A1Q9BXS0 654 aaPredicted RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 TRIM6Q9C030 488 aaPredicted RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 RPF1Q9H9Y2 349 aaKnown RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 PLEKHA5Q9HAU0 1116 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 PRDM5Q9NQX1 630 aaPredicted RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 C1orf112Q9NSG2 853 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 RBAKQ9NYW8 714 aaPredicted RBP17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 IPPQ9Y573 584 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 TANC1Q9C0D5 1861 aa17.35■□□□□ 0.37
CLTCL1-207ENST00000611723 A0A1B0GTH6 734 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 C9IYK1 514 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 ENPP3O14638 875 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 IL18RAPO95256 599 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 SERPINC1P01008 464 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 GTF2H1P32780 548 aa17.34■□□□□ 0.37
CLTCL1-207ENST00000611723 UBASH3AP57075 661 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms