RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 POMGNT1Q8WZA1 660 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 CLP1Q92989 425 aaKnown RBP16.31■□□□□ 0.2
DDX39A-221ENST00000593026 SAMD11Q96NU1 681 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 C17orf80Q9BSJ5 609 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 GBP3Q9H0R5 595 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 CERS4Q9HA82 394 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 TOPORSQ9NS56 1045 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-221ENST00000593026 TBC1D13Q9NVG8 400 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 KANSL3Q9P2N6 904 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 MTUS1Q9ULD2 1270 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 STYXL1Q9Y6J8 313 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 OGTO15294 1046 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 CTNNB1P35222 781 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 HOXD13P35453 343 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 SCNN1GP51170 649 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 BMT2Q1RMZ1 405 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 SEZ6Q53EL9 994 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 TMEM192Q8IY95 271 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 ARNTL2Q8WYA1 636 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 FAM161BQ96MY7 647 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 ACAP3Q96P50 834 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 CWH43Q9H720 699 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 RALGAPA2Q2PPJ7 1873 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 NLRC5Q86WI3 1866 aa16.3■□□□□ 0.2
DDX39A-221ENST00000593026 KIAA1671Q9BY89 1806 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 FAM189A1O60320 539 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 KIF20AO95235 890 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 POMCP01189 267 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 CLTAP09496 248 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 LINC00271P0C7V0 271 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 LAG3P18627 525 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 GARTP22102 1010 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 ADSSP30520 456 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 CAMK4Q16566 473 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 KNOP1Q1ED39 458 aaKnown RBP16.29■□□□□ 0.2
DDX39A-221ENST00000593026 EPC2Q52LR7 807 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 Q7L0L9 218 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 HS2ST1Q7LGA3 356 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-221ENST00000593026 SEMA6BQ9H3T3 888 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 AAASQ9NRG9 546 aa16.29■□□□□ 0.2
DDX39A-221ENST00000593026 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
DDX39A-221ENST00000593026 ZC3H11AO75152 810 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDX39A-221ENST00000593026 BMPR1AP36894 532 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 TNFSF9P41273 254 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 GRIK3Q13003 919 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 ZBTB41Q5SVQ8 909 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-221ENST00000593026 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 GSTCDQ8NEC7 633 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 FBXO22Q8NEZ5 403 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 SNX27Q96L92 541 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 ZNF558Q96NG5 402 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 CBWD1Q9BRT8 395 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 GTPBP4Q9BZE4 634 aaKnown RBP16.28■□□□□ 0.2
DDX39A-221ENST00000593026 CLSTN2Q9H4D0 955 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 AGPAT3Q9NRZ7 376 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 MIOSQ9NXC5 875 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 MAPK8IP1Q9UQF2 711 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 PCDHB12Q9Y5F1 795 aa16.28■□□□□ 0.2
DDX39A-221ENST00000593026 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.2
DDX39A-221ENST00000593026 C5orf67F2Z3F1 127 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 PTGESO14684 152 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 TGFB1I1O43294 461 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 DDHD2O94830 711 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 MBD3O95983 291 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.2
DDX39A-221ENST00000593026 RB1P06400 928 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 CXCL8P10145 99 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 MCM4P33991 863 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 ACOT2P49753 483 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 SNRPFP62306 86 aaKnown RBP16.27■□□□□ 0.2
DDX39A-221ENST00000593026 GRIN2CQ14957 1233 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 ZNF280BQ86YH2 543 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 GUF1Q8N442 669 aaKnown RBP16.27■□□□□ 0.2
DDX39A-221ENST00000593026 GOLGA5Q8TBA6 731 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 GPT2Q8TD30 523 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 SAAL1Q96ER3 474 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 PLVAPQ9BX97 442 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 CXCL16Q9H2A7 254 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 PRDM12Q9H4Q4 367 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 PCIF1Q9H4Z3 704 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 NRDE2Q9H7Z3 1164 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 RPF1Q9H9Y2 349 aaKnown RBP16.27■□□□□ 0.2
DDX39A-221ENST00000593026 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 CGNQ9P2M7 1197 aaKnown RBP16.27■□□□□ 0.2
DDX39A-221ENST00000593026 CPSF3Q9UKF6 684 aaKnown RBP16.27■□□□□ 0.2
DDX39A-221ENST00000593026 MAN1B1Q9UKM7 699 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 PLAGL2Q9UPG8 496 aa16.27■□□□□ 0.2
DDX39A-221ENST00000593026 CHD9Q3L8U1 2897 aa16.27■□□□□ 0.19
DDX39A-221ENST00000593026 CITO14578 2027 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 CARNS1A5YM72 827 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 EPOPA6NHQ4 379 aa16.26■□□□□ 0.19
DDX39A-221ENST00000593026 KIAA0391O15091 583 aaKnown RBP16.26■□□□□ 0.19
DDX39A-221ENST00000593026 THP07101 528 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms