RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 GRAMD1AQ96CP6 724 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 POLD4Q9HCU8 107 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 EPS15L1Q9UBC2 864 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 TPX2Q9ULW0 747 aaKnown RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 SCAF8Q9UPN6 1271 aaKnown RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 EMSYQ7Z589 1322 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 AGTP01019 485 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 TRIM49P0CI25 452 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 TRIM49CP0CI26 452 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 ANKRD20A4Q4UJ75 823 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 ANKRD20A8PQ5CZ79 823 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 ANKRD20A2Q5SQ80 823 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 ANKRD20A1Q5TYW2 823 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 TRIM72Q6ZMU5 477 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 FAM47EQ6ZV65 393 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 PGBD3Q8N328 593 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF473Q8WTR7 871 aaKnown RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 MAML1Q92585 1016 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 LRGUKQ96M69 825 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 HEXIM2Q96MH2 286 aaKnown RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 HMX1Q9NP08 348 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 FHOD1Q9Y613 1164 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 NPHP3-ACAD11A0A0J9YXS1 232 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 PLA2G4AP47712 749 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.257e-7■■■□□ 18.6
DNMT1-228ENST00000592705 STAT5BP51692 787 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 BAATQ14032 418 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 KIAA1755Q5JYT7 1200 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 SCARA5Q6ZMJ2 495 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 RHOT1Q8IXI2 618 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 TGS1Q96RS0 853 aaKnown RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 NCAPGQ9BPX3 1015 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 C11orf70Q9BRQ4 267 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 KLC2Q9H0B6 622 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 COPEO14579 308 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 RGL2O15211 777 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 AGBL2Q5U5Z8 902 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 WDR93Q6P2C0 686 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 TMEM270Q6UE05 265 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 SYDE1Q6ZW31 735 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-228ENST00000592705 FAF2Q96CS3 445 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 MTRQ99707 1265 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 FUT8Q9BYC5 575 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 KLC4Q9NSK0 619 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 GABBR1Q9UBS5 961 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 NEMP1O14524 444 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 KPNA2P52292 529 aaKnown RBP13.5□□□□□ -0.25
DNMT1-228ENST00000592705 TFDP2Q14188 446 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 BZW1Q7L1Q6 419 aaKnown RBP13.5□□□□□ -0.25
DNMT1-228ENST00000592705 CRLF3Q8IUI8 442 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 SLC9A2Q9UBY0 812 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
DNMT1-228ENST00000592705 FLT1P17948 1338 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 TTI1O43156 1089 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 FKTNO75072 461 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 RPS6KA5O75582 802 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF18P17022 549 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 ERVK-24P63145 666 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 C16orf86Q6ZW13 317 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 CCT8L2Q96SF2 557 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 TTC1Q99614 292 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 MROH8Q9H579 483 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 TLK1Q9UKI8 766 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 A0A0G2JND7 137 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 HSPA9P38646 679 aaKnown RBP13.5□□□□□ -0.25
DNMT1-228ENST00000592705 DGKDQ16760 1214 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF667Q5HYK9 610 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 TRAPPC11Q7Z392 1133 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 DNAAF3Q8N9W5 541 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 SLC35G2Q8TBE7 412 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 SYT17Q9BSW7 474 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 APEX2Q9UBZ4 518 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 ZFP69BQ9UJL9 534 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 GALCP54803 685 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 PSMC5P62195 406 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 TROAPQ12815 778 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 SKA2Q8WVK7 121 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-228ENST00000592705 SEPT1Q8WYJ6 367 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 HSPH1Q92598 858 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 LRRC37BQ96QE4 947 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
DNMT1-228ENST00000592705 TMEM88BA6NKF7 163 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 MAGEB2O15479 319 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 PHF2O75151 1096 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 KRT14P02533 472 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 SLC1A1P43005 524 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 NCAPHQ15003 741 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 RBBP5Q15291 538 aaKnown RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 FBXO33Q7Z6M2 555 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
DNMT1-228ENST00000592705 PIN4Q9Y237 131 aaKnown RBP13.49□□□□□ -0.25
DNMT1-228ENST00000592705 GYG2O15488 501 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms