RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 NLRP4Q96MN2 994 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 GUCD1Q96NT3 240 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 DNAJC7Q99615 494 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 DESI2Q9BSY9 194 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 TARS2Q9BW92 718 aaKnown RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 CCDC113Q9H0I3 377 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 TUT1Q9H6E5 874 aaKnown RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 SCN5AQ14524 2016 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 LRRC53A6NM62 1247 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 TTLL13PA6NNM8 815 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
APOC1-205ENST00000589781 TREHO43280 583 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 STX10O60499 249 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 NOL4O94818 638 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 ARHGEF15O94989 841 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 PIGRP01833 764 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 PRKCBP05771 671 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 SRGAP2CP0DJJ0 459 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 SMIM10L2AP0DMW4 78 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 SMIM10L2BP0DMW5 78 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 SLC9A1P19634 815 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 GARTP22102 1010 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 KLRC1P26715 233 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 ABCD1P33897 745 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 MATR3P43243 847 aaKnown RBP eCLIP11.07□□□□□ -0.64
APOC1-205ENST00000589781 FMO5P49326 533 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 VAMP7P51809 220 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 ZBED6P86452 979 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 C1orf220Q5T0J3 134 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 OTOP2Q7RTS6 562 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 SERINC5Q86VE9 423 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 ZBTB8OSQ8IWT0 167 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 EXOC8Q8IYI6 725 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 TMEM199Q8N511 208 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 DEFB123Q8N688 67 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 BAP1Q92560 729 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 KCNN1Q92952 543 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 ZBTB45Q96K62 511 aaPredicted RBP11.07□□□□□ -0.64
APOC1-205ENST00000589781 NAA15Q9BXJ9 866 aaKnown RBP11.07□□□□□ -0.64
APOC1-205ENST00000589781 HAPLN2Q9GZV7 340 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 NLRC4Q9NPP4 1024 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 TOPORSQ9NS56 1045 aaPredicted RBP11.07□□□□□ -0.64
APOC1-205ENST00000589781 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 CEP72Q9P209 647 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 ANKFY1Q9P2R3 1169 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 AJAP1Q9UKB5 411 aaPredicted RBP11.07□□□□□ -0.64
APOC1-205ENST00000589781 AKT3Q9Y243 479 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 FHOD1Q9Y613 1164 aa11.07□□□□□ -0.64
APOC1-205ENST00000589781 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 K7ERI5 159 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 MAPK13O15264 365 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 FGBP02675 491 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 VTNP04004 478 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 CKBP12277 381 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 POLR2FP61218 127 aaKnown RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 SMAD3P84022 425 aaKnown RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 CYP24A1Q07973 514 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 PPP3CAQ08209 521 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 TFDP1Q14186 410 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 MXD4Q14582 209 aaPredicted RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 SNRNP35Q16560 246 aaKnown RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 MEA1Q16626 185 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 EXOC3L4Q17RC7 722 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 ZNF618Q5T7W0 954 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 DPY19L2P1Q6NXN4 242 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 WDR59Q6PJI9 974 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 MTHFD1LQ6UB35 978 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 CYP26C1Q6V0L0 522 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 GBP6Q6ZN66 633 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 INTS8Q75QN2 995 aaKnown RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 CACNA2D4Q7Z3S7 1137 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 DEFB128Q7Z7B8 93 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 GPD1LQ8N335 351 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 C7orf31Q8N865 590 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 ACRBPQ8NEB7 543 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 OR8K1Q8NGG5 319 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 TMEM174Q8WUU8 243 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 FAM84AQ96KN4 292 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 PPP1R13BQ96KQ4 1090 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 C16orf45Q96MC5 204 aaPredicted RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 CHP1Q99653 195 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 FAM213AQ9BRX8 229 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 INTS2Q9H0H0 1204 aaKnown RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 C2orf40Q9H1Z8 148 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 SIX2Q9NPC8 291 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 KCNG1Q9UIX4 513 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 YBX2Q9Y2T7 364 aaKnown RBP11.06□□□□□ -0.64
APOC1-205ENST00000589781 TET1Q8NFU7 2136 aa11.06□□□□□ -0.64
APOC1-205ENST00000589781 LRRIQ3A6PVS8 624 aaPredicted RBP11.05□□□□□ -0.64
APOC1-205ENST00000589781 INO80B-WBP1J3KQ70 363 aa11.05□□□□□ -0.64
APOC1-205ENST00000589781 MAGEB2O15479 319 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms