RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 AXLP30530 894 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 CIITAP33076 1130 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 DRP2Q13474 957 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 MTERF2Q49AM1 385 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 PABPC1LQ4VXU2 614 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 CEP68Q76N32 757 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 LONP2Q86WA8 852 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 CHD1LQ86WJ1 897 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 GLYCTKQ8IVS8 523 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 NPAS3Q8IXF0 933 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 SPEM1Q8N4L4 309 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 CRYGNQ8WXF5 182 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 FAM3CQ92520 227 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 IRF7Q92985 503 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ELSPBP1Q96BH3 223 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 MSANTD3Q96H12 275 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 BRD9Q9H8M2 597 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 LMAN1LQ9HAT1 526 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ZSWIM6Q9HCJ5 1215 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 TRPV5Q9NQA5 729 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ADAM28Q9UKQ2 775 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 MRPS23Q9Y3D9 190 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 PPME1Q9Y570 386 aa9.79□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ZMYM2Q9UBW7 1377 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 CCL16O15467 120 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 HRO43593 1189 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 GAS7O60861 476 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 MAFO75444 373 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 TADA2AO75478 443 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ERLIN2O94905 339 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 KCNK5O95279 499 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ZNF806P0C7X5 589 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 HOXA6P31267 233 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 AFF1P51825 1210 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 NTHL1P78549 312 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ELAVL2Q12926 359 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 AAMPQ13685 434 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 LRRC32Q14392 662 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 JAKMIP3Q5VZ66 844 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 MICU3Q86XE3 530 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 SMC5Q8IY18 1101 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 FAM160A2Q8N612 972 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ITFG1Q8TB96 612 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 CCDC12Q8WUD4 166 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 GAD1Q99259 594 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 LSM14BQ9BX40 385 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 TEKT3Q9BXF9 490 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 GPR62Q9BZJ7 368 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 IFT122Q9HBG6 1241 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ZFP14Q9HCL3 533 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 AVENQ9NQS1 362 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 GIT1Q9Y2X7 761 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 COL4A3BPQ9Y5P4 624 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 CNTNAP5Q8WYK1 1306 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 WDR81Q562E7 1941 aa9.78□□□□□ -0.84
CDK5RAP3-224ENST00000582275 ZFYVE26Q68DK2 2539 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ESYT2A0FGR8 921 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 C1QTNF9BB2RNN3 333 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ASAP2O43150 1006 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 DKC1O60832 514 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 C1QTNF9P0C862 333 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 HOXB1P14653 301 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RPL17P18621 184 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MLH1P40692 756 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MLLT6P55198 1093 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PTH1RQ03431 593 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 UGCGQ16739 394 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 STPG1Q5TH74 334 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 NOTUMQ6P988 496 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 LRSAM1Q6UWE0 723 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PSPC1Q8WXF1 523 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SLC7A3Q8WY07 619 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PIK3R5Q8WYR1 880 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MAP4K1Q92918 833 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CEP89Q96ST8 783 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 TTPALQ9BTX7 342 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 TRMT61BQ9BVS5 477 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 IL25Q9H293 177 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RWDD1Q9H446 243 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 C6orf50Q9HD87 102 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 IPPQ9Y573 584 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PCDHGA5Q9Y5G8 931 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 V9GY48 417 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 GREB1Q4ZG55 1949 aa9.77□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CEP295Q9C0D2 2601 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CHURC1-FNTBB4DL54 471 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ZNF197O14709 1029 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CHMP2AO43633 222 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 GNA11P29992 359 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 HOXA11P31270 313 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 FNTBP49356 437 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SCNN1GP51170 649 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SATB1Q01826 763 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms