RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 GIT1Q9Y2X7 761 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 SZT2Q5T011 3432 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 A0A0B4J269 797 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 ADSSP30520 456 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 MCM4P33991 863 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 TNFSF9P41273 254 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 BMT2Q1RMZ1 405 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 ZNF697Q5TEC3 545 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 SLFN12LQ6IEE8 588 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 Q7L0L9 218 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
PFN1-203ENST00000574872 GSDMAQ96QA5 445 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 TGS1Q96RS0 853 aaKnown RBP17.76■□□□□ 0.43
PFN1-203ENST00000574872 RPS6KC1Q96S38 1066 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 CBWD1Q9BRT8 395 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 CLSTN2Q9H4D0 955 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 ZNF576Q9H609 170 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 TBC1D13Q9NVG8 400 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 MAN1B1Q9UKM7 699 aa17.76■□□□□ 0.43
PFN1-203ENST00000574872 BIN1O00499 593 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 OGTO15294 1046 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 PBX3P40426 434 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 YARSP54577 528 aaKnown RBP17.75■□□□□ 0.43
PFN1-203ENST00000574872 RNASELQ05823 741 aaKnown RBP17.75■□□□□ 0.43
PFN1-203ENST00000574872 KNOP1Q1ED39 458 aaKnown RBP17.75■□□□□ 0.43
PFN1-203ENST00000574872 GLRA4Q5JXX5 417 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 ZSWIM2Q8NEG5 633 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 SPATA20Q8TB22 786 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 ARNTL2Q8WYA1 636 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 SAAL1Q96ER3 474 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 ACAP3Q96P50 834 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 MRPL9Q9BYD2 267 aaKnown RBP17.75■□□□□ 0.43
PFN1-203ENST00000574872 PCIF1Q9H4Z3 704 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 MIOSQ9NXC5 875 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 AGO2Q9UKV8 859 aaKnown RBP17.75■□□□□ 0.43
PFN1-203ENST00000574872 STYXL1Q9Y6J8 313 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 CHD7Q9P2D1 2997 aa17.75■□□□□ 0.43
PFN1-203ENST00000574872 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
PFN1-203ENST00000574872 CLIC2O15247 247 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 TGFB1I1O43294 461 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 FAM189A1O60320 539 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 B4GALT3O60512 393 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 ZC3H11AO75152 810 aaKnown RBP eCLIP17.74■□□□□ 0.434e-23■■□□□ 13.2
PFN1-203ENST00000574872 LINC00271P0C7V0 271 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 CXCL8P10145 99 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 CTNNB1P35222 781 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 ACOT2P49753 483 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 ARMCX5Q6P1M9 558 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 GSTCDQ8NEC7 633 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 NUP62CLQ9H1M0 184 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 CWH43Q9H720 699 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 AGPAT3Q9NRZ7 376 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 PLAGL2Q9UPG8 496 aa17.74■□□□□ 0.43
PFN1-203ENST00000574872 GOLGA8IPA6NC78 632 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 EPOPA6NHQ4 379 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 GOLGA8JA6NMD2 632 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 PTGESO14684 152 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
PFN1-203ENST00000574872 CLTAP09496 248 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 ERVK-21P61565 698 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 EPC2Q52LR7 807 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 ZNF658Q5TYW1 1059 aaPredicted RBP17.73■□□□□ 0.43
PFN1-203ENST00000574872 HS2ST1Q7LGA3 356 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 ZNF280BQ86YH2 543 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 CLP1Q92989 425 aaKnown RBP17.73■□□□□ 0.43
PFN1-203ENST00000574872 FAM212AQ96EL1 285 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 SNX27Q96L92 541 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 FAM213AQ9BRX8 229 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 SEMA6BQ9H3T3 888 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 NRDE2Q9H7Z3 1164 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
PFN1-203ENST00000574872 CDH23Q9H251 3354 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 MYO9BQ13459 2157 aa17.73■□□□□ 0.43
PFN1-203ENST00000574872 TMEM265A0A087WTH1 108 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 RFXAPO00287 272 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 INPPL1O15357 1258 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 DDHD2O94830 711 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 GARTP22102 1010 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 CYP2J2P51589 502 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 SPAG1Q07617 926 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 GRIN2CQ14957 1233 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 ENOX2Q16206 610 aaKnown RBP17.72■□□□□ 0.43
PFN1-203ENST00000574872 SLC10A6Q3KNW5 377 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 DEFB123Q8N688 67 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 COLGALT1Q8NBJ5 622 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 FAM193BQ96PV7 902 aaPredicted RBP17.72■□□□□ 0.43
PFN1-203ENST00000574872 PRDM12Q9H4Q4 367 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 RPF1Q9H9Y2 349 aaKnown RBP17.72■□□□□ 0.43
PFN1-203ENST00000574872 HSPBP1Q9NZL4 362 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 KANSL3Q9P2N6 904 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 DNAJB4Q9UDY4 337 aa17.72■□□□□ 0.43
PFN1-203ENST00000574872 CPSF3Q9UKF6 684 aaKnown RBP17.72■□□□□ 0.43
PFN1-203ENST00000574872 KIAA1671Q9BY89 1806 aa17.71■□□□□ 0.43
PFN1-203ENST00000574872 NT5C1B-RDH14C9J2C7 533 aa17.71■□□□□ 0.43
PFN1-203ENST00000574872 CSPG5O95196 566 aa17.71■□□□□ 0.43
PFN1-203ENST00000574872 KIF20AO95235 890 aa17.71■□□□□ 0.43
PFN1-203ENST00000574872 MBD3O95983 291 aa17.71■□□□□ 0.43
PFN1-203ENST00000574872 LAG3P18627 525 aa17.71■□□□□ 0.43
PFN1-203ENST00000574872 BMPR1AP36894 532 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms