RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 FANCGO15287 622 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 HOXD8P13378 290 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-210ENST00000566290 VAMP7P51809 220 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 EFNA5P52803 228 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 TUBB4BP68371 445 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 MYL7Q01449 175 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 LAMC2Q13753 1193 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 FSCN1Q16658 493 aaKnown RBP18.22■□□□□ 0.51
RAB40C-210ENST00000566290 MTERF2Q49AM1 385 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 ZNF592Q92610 1267 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 MFSD14AQ96MC6 490 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 C1QTNF1Q9BXJ1 281 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 PRDM12Q9H4Q4 367 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 POLD4Q9HCU8 107 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 ADGRA3Q8IWK6 1321 aa18.22■□□□□ 0.51
RAB40C-210ENST00000566290 PIEZO1Q92508 2521 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 BTNL10A8MVZ5 291 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 CCDC172P0C7W6 258 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 FERP16591 822 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 ADSSP30520 456 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 EIF4A3P38919 411 aaKnown RBP18.21■□□□□ 0.51
RAB40C-210ENST00000566290 CLDN10P78369 228 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 ADGRE1Q14246 886 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 ASIC2Q16515 512 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 LY6KQ17RY6 165 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 EPC2Q52LR7 807 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 C1orf53Q5VUE5 145 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 IER5Q5VY09 327 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 CDCA2Q69YH5 1023 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-210ENST00000566290 SLFN12LQ6IEE8 588 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 CXCL17Q6UXB2 119 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 ZPBP2Q6X784 338 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 MAEAQ7L5Y9 396 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 KSR1Q8IVT5 923 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 DHX37Q8IY37 1157 aaKnown RBP18.21■□□□□ 0.51
RAB40C-210ENST00000566290 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
RAB40C-210ENST00000566290 JAKMIP2Q96AA8 810 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 WDR24Q96S15 920 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 GAS2L1Q99501 681 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-210ENST00000566290 CBWD1Q9BRT8 395 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 STK33Q9BYT3 514 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 AP5M1Q9H0R1 490 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 SPC25Q9HBM1 224 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 STARD7Q9NQZ5 370 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 APEX2Q9UBZ4 518 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 Q9Y3F1 56 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 TELO2Q9Y4R8 837 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 MRFAP1Q9Y605 127 aa18.21■□□□□ 0.51
RAB40C-210ENST00000566290 NOP56O00567 594 aaKnown RBP18.2■□□□□ 0.5
RAB40C-210ENST00000566290 AKR1B10O60218 316 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 TXNP10599 105 aaKnown RBP18.2■□□□□ 0.5
RAB40C-210ENST00000566290 SLC9A1P19634 815 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 GLRA2P23416 452 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 PBX2P40425 430 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 POU5F1BQ06416 359 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 KIF5AQ12840 1032 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 MXD4Q14582 209 aaPredicted RBP18.2■□□□□ 0.5
RAB40C-210ENST00000566290 SNRNP35Q16560 246 aaKnown RBP18.2■□□□□ 0.5
RAB40C-210ENST00000566290 SLC18A3Q16572 532 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 SLC39A4Q6P5W5 647 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 TAS1R3Q7RTX0 852 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
RAB40C-210ENST00000566290 LMO3Q8TAP4 145 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 FAM81BQ96LP2 452 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 SPAG5Q96R06 1193 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 NFKBIZQ9BYH8 718 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 IFIH1Q9BYX4 1025 aaKnown RBP18.2■□□□□ 0.5
RAB40C-210ENST00000566290 DEF6Q9H4E7 631 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 NENFQ9UMX5 172 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 GRIN2DO15399 1336 aa18.2■□□□□ 0.5
RAB40C-210ENST00000566290 CTAGE9A4FU28 777 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 ZNF263O14978 683 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 HBP1O60381 514 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 PQBP1O60828 265 aaKnown RBP18.19■□□□□ 0.5
RAB40C-210ENST00000566290 ZC3H11AO75152 810 aaKnown RBP eCLIP18.19■□□□□ 0.5
RAB40C-210ENST00000566290 LDHAP00338 332 aaKnown RBP18.19■□□□□ 0.5
RAB40C-210ENST00000566290 GH1P01241 217 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 SP4Q02446 784 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 ARHGAP1Q07960 439 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 STRN3Q13033 797 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 C1orf220Q5T0J3 134 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 CCDC122Q5T0U0 273 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 IRF2BP2Q7Z5L9 587 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 KIAA1328Q86T90 577 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 GPD1LQ8N335 351 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 PPTC7Q8NI37 304 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 PARD3BQ8TEW8 1205 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 CRACR2AQ9BSW2 395 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 LRFN3Q9BTN0 628 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 INTS2Q9H0H0 1204 aaKnown RBP18.19■□□□□ 0.5
RAB40C-210ENST00000566290 C2orf40Q9H1Z8 148 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 IKZF4Q9H2S9 585 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 NLRC4Q9NPP4 1024 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 INTUQ9ULD6 942 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 ARIH1Q9Y4X5 557 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-210ENST00000566290 FHOD1Q9Y613 1164 aa18.19■□□□□ 0.5
RAB40C-210ENST00000566290 GRXCR1A8MXD5 290 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms