RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 HCSTQ9UBK5 93 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 LINC00271P0C7V0 271 aa27.91■■■□□ 2.06
SMAD6-202ENST00000557916 BMT2Q1RMZ1 405 aa27.91■■■□□ 2.06
SMAD6-202ENST00000557916 NELFCDQ8IXH7 590 aa27.91■■■□□ 2.06
SMAD6-202ENST00000557916 TMEM192Q8IY95 271 aa27.91■■■□□ 2.06
SMAD6-202ENST00000557916 ACAP3Q96P50 834 aa27.91■■■□□ 2.06
SMAD6-202ENST00000557916 GSDMAQ96QA5 445 aa27.91■■■□□ 2.06
SMAD6-202ENST00000557916 RWDD3Q9Y3V2 267 aa27.91■■■□□ 2.06
SMAD6-202ENST00000557916 ZMYM2Q9UBW7 1377 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 INPPL1O15357 1258 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 POMCP01189 267 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 SCNN1GP51170 649 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 YARSP54577 528 aaKnown RBP27.9■■■□□ 2.06
SMAD6-202ENST00000557916 RNASELQ05823 741 aaKnown RBP27.9■■■□□ 2.06
SMAD6-202ENST00000557916 SEZ6Q53EL9 994 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 Q7L0L9 218 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 SPATA20Q8TB22 786 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 ARNTL2Q8WYA1 636 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 POMGNT1Q8WZA1 660 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 FAM161BQ96MY7 647 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 SAMD11Q96NU1 681 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 GBP3Q9H0R5 595 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 CWH43Q9H720 699 aa27.9■■■□□ 2.06
SMAD6-202ENST00000557916 OGTO15294 1046 aa27.89■■■□□ 2.06
SMAD6-202ENST00000557916 ADSSP30520 456 aa27.89■■■□□ 2.06
SMAD6-202ENST00000557916 RPS6KC1Q96S38 1066 aa27.89■■■□□ 2.06
SMAD6-202ENST00000557916 TOPORSQ9NS56 1045 aaPredicted RBP27.89■■■□□ 2.06
SMAD6-202ENST00000557916 MIOSQ9NXC5 875 aa27.89■■■□□ 2.06
SMAD6-202ENST00000557916 AGO2Q9UKV8 859 aaKnown RBP27.89■■■□□ 2.06
SMAD6-202ENST00000557916 CLTAP09496 248 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 BMPR1AP36894 532 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 CAMK4Q16566 473 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 KYAT1Q16773 422 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 EPC2Q52LR7 807 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 DEFB123Q8N688 67 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 GSTCDQ8NEC7 633 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 AAASQ9NRG9 546 aa27.88■■■□□ 2.05
SMAD6-202ENST00000557916 FAM189A1O60320 539 aa27.87■■■□□ 2.05
SMAD6-202ENST00000557916 GARTP22102 1010 aa27.87■■■□□ 2.05
SMAD6-202ENST00000557916 CTNNB1P35222 781 aa27.87■■■□□ 2.05
SMAD6-202ENST00000557916 GRIN2CQ14957 1233 aa27.87■■■□□ 2.05
SMAD6-202ENST00000557916 KNOP1Q1ED39 458 aaKnown RBP27.87■■■□□ 2.05
SMAD6-202ENST00000557916 CXCL16Q9H2A7 254 aa27.87■■■□□ 2.05
SMAD6-202ENST00000557916 SZT2Q5T011 3432 aa27.87■■■□□ 2.05
SMAD6-202ENST00000557916 KIF20AO95235 890 aa27.86■■■□□ 2.05
SMAD6-202ENST00000557916 LAG3P18627 525 aa27.86■■■□□ 2.05
SMAD6-202ENST00000557916 TNFSF9P41273 254 aa27.86■■■□□ 2.05
SMAD6-202ENST00000557916 ZBTB41Q5SVQ8 909 aa27.86■■■□□ 2.05
SMAD6-202ENST00000557916 ZNF280BQ86YH2 543 aa27.86■■■□□ 2.05
SMAD6-202ENST00000557916 FBXO22Q8NEZ5 403 aa27.86■■■□□ 2.05
SMAD6-202ENST00000557916 FAM193BQ96PV7 902 aaPredicted RBP27.86■■■□□ 2.05
SMAD6-202ENST00000557916 NRDE2Q9H7Z3 1164 aa27.86■■■□□ 2.05
SMAD6-202ENST00000557916 CHD7Q9P2D1 2997 aa27.85■■■□□ 2.05
SMAD6-202ENST00000557916 PTGESO14684 152 aa27.85■■■□□ 2.05
SMAD6-202ENST00000557916 TGFB1I1O43294 461 aa27.85■■■□□ 2.05
SMAD6-202ENST00000557916 ARMCX5Q6P1M9 558 aa27.85■■■□□ 2.05
SMAD6-202ENST00000557916 HS2ST1Q7LGA3 356 aa27.85■■■□□ 2.05
SMAD6-202ENST00000557916 CBWD1Q9BRT8 395 aa27.85■■■□□ 2.05
SMAD6-202ENST00000557916 PCDHB12Q9Y5F1 795 aa27.85■■■□□ 2.05
SMAD6-202ENST00000557916 EPOPA6NHQ4 379 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 ZC3H11AO75152 810 aaKnown RBP eCLIP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 DDHD2O94830 711 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 RB1P06400 928 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 ACOT2P49753 483 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 SNRPFP62306 86 aaKnown RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 GRIK3Q13003 919 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 SLC10A6Q3KNW5 377 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 ALKAL1Q6UXT8 129 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 COLGALT1Q8NBJ5 622 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 GPT2Q8TD30 523 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 SNX27Q96L92 541 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 PLVAPQ9BX97 442 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 CLSTN2Q9H4D0 955 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 PRDM12Q9H4Q4 367 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 PCIF1Q9H4Z3 704 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 AGPAT3Q9NRZ7 376 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 CPSF3Q9UKF6 684 aaKnown RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 PLAGL2Q9UPG8 496 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 MAPK8IP1Q9UQF2 711 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 C5orf67F2Z3F1 127 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 THP07101 528 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 CXCL8P10145 99 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 MCM4P33991 863 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 XKR4Q5GH76 650 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 ZNF658Q5TYW1 1059 aaPredicted RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 KCNT2Q6UVM3 1135 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 SMYD4Q8IYR2 804 aaPredicted RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 GUF1Q8N442 669 aaKnown RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 ZNF558Q96NG5 402 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 GTPBP4Q9BZE4 634 aaKnown RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 RPF1Q9H9Y2 349 aaKnown RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 CGNQ9P2M7 1197 aaKnown RBP27.84■■■□□ 2.05
SMAD6-202ENST00000557916 DNAJB4Q9UDY4 337 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 MAN1B1Q9UKM7 699 aa27.84■■■□□ 2.05
SMAD6-202ENST00000557916 RFXAPO00287 272 aa27.83■■■□□ 2.05
SMAD6-202ENST00000557916 MEFVO15553 781 aaPredicted RBP27.83■■■□□ 2.05
SMAD6-202ENST00000557916 B4GALT3O60512 393 aa27.83■■■□□ 2.05
SMAD6-202ENST00000557916 LDHAP00338 332 aaKnown RBP27.83■■■□□ 2.05
SMAD6-202ENST00000557916 PBX3P40426 434 aa27.83■■■□□ 2.05
SMAD6-202ENST00000557916 ALDH7A1P49419 539 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms