RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ZEB1P37275 1124 aaPredicted RBP5.94□□□□□ -1.46
VRK1-207ENST00000557352 FLT3LGP49771 235 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 MST1LQ2TV78 715 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 PDCD4Q53EL6 469 aaKnown RBP5.94□□□□□ -1.46
VRK1-207ENST00000557352 FAM47AQ5JRC9 791 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 FAM102AQ5T9C2 384 aaPredicted RBP5.94□□□□□ -1.46
VRK1-207ENST00000557352 HECTD2Q5U5R9 776 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 METRNLQ641Q3 311 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 CMIPQ8IY22 773 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 BEND2Q8NDZ0 799 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 SLC35B2Q8TB61 432 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 TSPEARQ8WU66 669 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 TOR3AQ9H497 397 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 CAAP1Q9H8G2 361 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 CYP4F11Q9HBI6 524 aa5.94□□□□□ -1.46
VRK1-207ENST00000557352 TLDC2A0PJX2 215 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 AKR1B10O60218 316 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 ADSLP30566 484 aaPredicted RBP5.93□□□□□ -1.46
VRK1-207ENST00000557352 BMPR1AP36894 532 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 CCT2P78371 535 aaKnown RBP5.93□□□□□ -1.46
VRK1-207ENST00000557352 MRPS9P82933 396 aaKnown RBP5.93□□□□□ -1.46
VRK1-207ENST00000557352 TAP1Q03518 808 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 Q6YL49 198 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 REPS2Q8NFH8 660 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 GPR156Q8NFN8 814 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 ZFP28Q8NHY6 868 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 TGFBRAP1Q8WUH2 860 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 LMBR1Q8WVP7 490 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 RIN2Q8WYP3 895 aaPredicted RBP5.93□□□□□ -1.46
VRK1-207ENST00000557352 WDR11Q9BZH6 1224 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 VTA1Q9NP79 307 aa5.93□□□□□ -1.46
VRK1-207ENST00000557352 GOLGA8AA7E2F4 631 aa5.92□□□□□ -1.46
VRK1-207ENST00000557352 PTPN7P35236 360 aa5.92□□□□□ -1.46
VRK1-207ENST00000557352 SOX5P35711 763 aa5.92□□□□□ -1.46
VRK1-207ENST00000557352 Q6ZVL8 140 aa5.92□□□□□ -1.46
VRK1-207ENST00000557352 TRMT2AQ8IZ69 625 aaKnown RBP5.92□□□□□ -1.46
VRK1-207ENST00000557352 CPEB3Q8NE35 698 aaKnown RBP5.92□□□□□ -1.46
VRK1-207ENST00000557352 AUTS2Q8WXX7 1259 aa5.92□□□□□ -1.46
VRK1-207ENST00000557352 ORAI2Q96SN7 254 aa5.92□□□□□ -1.46
VRK1-207ENST00000557352 NEU1Q99519 415 aa5.92□□□□□ -1.46
VRK1-207ENST00000557352 QRSL1Q9H0R6 528 aaKnown RBP5.92□□□□□ -1.46
VRK1-207ENST00000557352 USP15Q9Y4E8 981 aaPredicted RBP5.92□□□□□ -1.46
VRK1-207ENST00000557352 DRGXA6NNA5 263 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 CXorf49A8MYA2 514 aaPredicted RBP5.91□□□□□ -1.46
VRK1-207ENST00000557352 WNT10BO00744 389 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 PJA2O43164 708 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 BRINP1O60477 761 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 SPATA31D3P0C874 917 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 CLRN1P58418 232 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 ADRM1Q16186 407 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 MUM1Q2TAK8 710 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 SPATA31D4Q6ZUB0 917 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 ZNF572Q7Z3I7 529 aaPredicted RBP5.91□□□□□ -1.46
VRK1-207ENST00000557352 KCNK18Q7Z418 384 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 AFAP1L2Q8N4X5 818 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 OR7D4Q8NG98 312 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 SLKQ9H2G2 1235 aaPredicted RBP5.91□□□□□ -1.46
VRK1-207ENST00000557352 BCO1Q9HAY6 547 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 SYBUQ9NX95 663 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 SCOCQ9UIL1 159 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 ATRNL1Q5VV63 1379 aa5.91□□□□□ -1.46
VRK1-207ENST00000557352 UNC119BA6NIH7 251 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 MARCH11A6NNE9 402 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 NUDT3O95989 172 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 ALOX15P16050 662 aaPredicted RBP5.9□□□□□ -1.46
VRK1-207ENST00000557352 HSD3B2P26439 372 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 MASP1P48740 699 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 CHN2P52757 468 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 USP14P54578 494 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 SCAND1P57086 179 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 GUCY1B3Q02153 619 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 ATXN7L2Q5T6C5 722 aaPredicted RBP5.9□□□□□ -1.46
VRK1-207ENST00000557352 LCORLQ8N3X6 602 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 FBXO18Q8NFZ0 1043 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 CHAC2Q8WUX2 184 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 FATE1Q969F0 183 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 ADAM2Q99965 735 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 IFT122Q9HBG6 1241 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 FPGT-TNNI3KV9GXZ4 949 aa5.9□□□□□ -1.46
VRK1-207ENST00000557352 PNPLA7Q6ZV29 1317 aa5.9□□□□□ -1.47
VRK1-207ENST00000557352 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 SNRPA1P09661 255 aaKnown RBP5.89□□□□□ -1.47
VRK1-207ENST00000557352 MTHFD2P13995 350 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 DDX6P26196 483 aaKnown RBP eCLIP5.89□□□□□ -1.47
VRK1-207ENST00000557352 ECHS1P30084 290 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 SREBF1P36956 1147 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 SP140Q13342 867 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 STAT4Q14765 748 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 AGAP9Q5VTM2 703 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 DPY19L2P1Q6NXN4 242 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 GIMAP6Q6P9H5 292 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 OLFML1Q6UWY5 402 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 CMTR2Q8IYT2 770 aaKnown RBP5.89□□□□□ -1.47
VRK1-207ENST00000557352 SUPT20HQ8NEM7 779 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 PHACTR3Q96KR7 559 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 GREM2Q9H772 168 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 ZNHIT2Q9UHR6 403 aa5.89□□□□□ -1.47
VRK1-207ENST00000557352 EPN1Q9Y6I3 576 aaPredicted RBP5.89□□□□□ -1.47
VRK1-207ENST00000557352 PIPSLA2A3N6 862 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms