RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TMEM177Q53S58 311 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 PRAMEF9Q5VWM5 478 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 FSTL4Q6MZW2 842 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 CKAP2LQ8IYA6 745 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 UNC5BQ8IZJ1 945 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 C8orf37Q96NL8 207 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 PITHD1Q9GZP4 211 aaPredicted RBP3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 CCDC113Q9H0I3 377 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 PCIF1Q9H4Z3 704 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 AKIP1Q9NQ31 210 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 TRPM5Q9NZQ8 1165 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 NDOR1Q9UHB4 597 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 MAGEL2Q9UJ55 1249 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 CDK11AQ9UQ88 783 aaPredicted RBP3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 UTRNP46939 3433 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 CHD2O14647 1828 aaKnown RBP3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 NKTRP30414 1462 aaKnown RBP3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 A0A0A6YYJ9 748 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 PIPSLA2A3N6 862 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 ESRRBO95718 433 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 MGAT1P26572 445 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 RANGAP1P46060 587 aaPredicted RBP3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 KIF11P52732 1056 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 BEAN1Q3B7T3 259 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 NAALADL2Q58DX5 795 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 TIGD7Q6NT04 549 aaPredicted RBP3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 SPATC1Q76KD6 591 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 BRAPQ7Z569 592 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 CMTR2Q8IYT2 770 aaKnown RBP3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 SIMC1Q8NDZ2 872 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 IL17RAQ96F46 866 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 HIST1H2AHQ96KK5 128 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 EXOC2Q96KP1 924 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 TUBGCP5Q96RT8 1024 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 HIST1H2AJQ99878 128 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 ENKD1Q9H0I2 346 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 SLC52A2Q9HAB3 445 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 ANKFY1Q9P2R3 1169 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 TLK1Q9UKI8 766 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 FRMD4BQ9Y2L6 1034 aa3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 EPN1Q9Y6I3 576 aaPredicted RBP3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.55□□□□□ -1.84
DEPDC4-204ENST00000547823 ATRNO75882 1429 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 NINLQ9Y2I6 1382 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 PRR5-ARHGAP8B1AHC4 643 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 ZNF185O15231 689 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 ZBTB48P10074 688 aaPredicted RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 HSP90B1P14625 803 aaKnown RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 APOBEC3AP31941 199 aaPredicted RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 HNRNPMP52272 730 aaKnown RBP eCLIP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 MPP3Q13368 585 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 ZNF174Q15697 407 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 DRICH1Q6PGQ1 229 aaPredicted RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 DDX53Q86TM3 631 aaKnown RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 FAM98AQ8NCA5 519 aaKnown RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 LRFN3Q9BTN0 628 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 DUSP26Q9BV47 211 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 PRDM13Q9H4Q3 707 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 ZNF768Q9H5H4 540 aaKnown RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 KMT5AQ9NQR1 393 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 USP36Q9P275 1121 aaKnown RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 DKK2Q9UBU2 259 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 TRPC5Q9UL62 973 aaPredicted RBP3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 CHST2Q9Y4C5 530 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 TET3O43151 1660 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 UNC13BO14795 1591 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 MAST1Q9Y2H9 1570 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 ERVK-7P63135 1459 aa3.54□□□□□ -1.84
DEPDC4-204ENST00000547823 SETD5Q9C0A6 1442 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 SPHKAPQ2M3C7 1700 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 CAMTA1Q9Y6Y1 1673 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 WASHC2CQ9Y4E1 1318 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 MYADML2A6NDP7 307 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 H7C1D1 291 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 IKBKBO14920 756 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 KCNQ2O43526 872 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 LPXNO60711 386 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 NCR1O76036 304 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 STC2O76061 302 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 ALDH1A2O94788 518 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 NDUFA10O95299 355 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 HNRNPLP14866 589 aaKnown RBP eCLIP3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 DDX6P26196 483 aaKnown RBP eCLIP3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 ADCY2Q08462 1091 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 MRPL49Q13405 166 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 KANSL1Q7Z3B3 1105 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 PHYKPLQ8IUZ5 450 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 SRRM1Q8IYB3 904 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 ZZZ3Q8IYH5 903 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 LILRA3Q8N6C8 439 aaPredicted RBP3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 C7orf31Q8N865 590 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 IGSF22Q8N9C0 903 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 OR5M3Q8NGP4 307 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 ANKS1AQ92625 1134 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 MRPL4Q9BYD3 311 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 MTG2Q9H4K7 406 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 TNPO3Q9Y5L0 923 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 EID1Q9Y6B2 187 aa3.53□□□□□ -1.84
DEPDC4-204ENST00000547823 GPATCH8Q9UKJ3 1502 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms